RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 MAPK13O15264 365 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 PARNO95453 639 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 RPL9P32969 192 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 USP41Q3LFD5 358 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 HYIQ5T013 277 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 TRIM67Q6ZTA4 783 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 DNAAF5Q86Y56 855 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC9A9Q8IVB4 645 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGAP24Q8N264 748 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 NIFKQ9BYG3 293 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 PAK5Q9P286 719 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 RASA4BC9J798 803 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 SOCS7O14512 581 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 TTI1O43156 1089 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 RASA4O43374 803 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 PABPC1LQ4VXU2 614 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 TTC19Q6DKK2 380 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC25A41Q8N5S1 370 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 TRMT13Q9NUP7 481 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 AFF4Q9UHB7 1163 aaKnown RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 AP4E1Q9UPM8 1137 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 SNX2O60749 519 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCDC130P13994 396 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TAC1P20366 129 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TYK2P29597 1187 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 KPNA1P52294 538 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 GRIK3Q13003 919 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ANKS3Q6ZW76 656 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 UNC93AQ86WB7 457 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 SRRM1Q8IYB3 904 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 N4BP2L2Q92802 583 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ATXN7L3BQ96GX2 97 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZFP42Q96MM3 310 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 EGFL8Q99944 293 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 PLA2G4CQ9UP65 541 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 MAFBQ9Y5Q3 323 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ASTN1O14525 1302 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 AP3B1O00203 1094 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 PSMD3O43242 534 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ADH1AP07327 375 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZACNQ401N2 412 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 THEMIS2Q5TEJ8 643 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ALS2CLQ60I27 953 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 UNC45BQ8IWX7 931 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ADAM32Q8TC27 787 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 SH3KBP1Q96B97 665 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TRIM54Q9BYV2 358 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 DUSP10Q9Y6W6 482 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 A0A0B4J269 797 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TBX4P57082 545 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 STX1BP61266 288 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 PLD1Q13393 1074 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 NNTQ13423 1086 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 DENND5BQ6ZUT9 1274 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TTC17Q96AE7 1141 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 UROC1Q96N76 676 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ULBP1Q9BZM6 244 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 LACRTQ9GZZ8 138 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 OSGEPQ9NPF4 335 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 UXTQ9UBK9 157 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 COL16A1Q07092 1604 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 MICAL2O94851 1124 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 RHOCP08134 193 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGAP25P42331 645 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 BRCC3P46736 316 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 NCKAP1LP55160 1127 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 HTRA3P83110 453 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 MDM2Q00987 491 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 CLEC16AQ2KHT3 1053 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 MMEL1Q495T6 779 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 TMTC4Q5T4D3 741 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 DCLRE1AQ6PJP8 1040 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 GSPT2Q8IYD1 628 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 PPHLN1Q8NEY8 458 aaKnown RBP14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 PBXIP1Q96AQ6 731 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 SMARCAL1Q9NZC9 954 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 USP18Q9UMW8 372 aa14.98□□□□□ -0.01
ARHGEF39-205ENST00000490638 GON4LQ3T8J9 2241 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 CHEK2O96017 543 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 PMS2P54278 862 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 LDLRAD1Q5T700 205 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 ANKMY2Q8IV38 441 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 GPATCH11Q8N954 259 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 ULK4Q96C45 1275 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 FAM84AQ96KN4 292 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 KCNF1Q9H3M0 494 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 PLAAQ9Y263 795 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 PHF2O75151 1096 aa14.97□□□□□ -0.01
ARHGEF39-205ENST00000490638 CKBP12277 381 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms