RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 PCED1BQ96HM7 432 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 TTLL2Q9BWV7 592 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 ADAMTS9Q9P2N4 1935 aa16.64■□□□□ 0.25
COL2A1-207ENST00000490609 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-207ENST00000490609 OLFM2O95897 454 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 CKMP06732 381 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 PCSK1P29120 753 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 PMLP29590 882 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 DMC1Q14565 340 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 FBXO43Q4G163 708 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 STPG1Q5TH74 334 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 ADGRG2Q8IZP9 1017 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 USP33Q8TEY7 942 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 NOC3LQ8WTT2 800 aaKnown RBP16.63■□□□□ 0.25
COL2A1-207ENST00000490609 ATP2A3Q93084 1043 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 MAGEC2Q9UBF1 373 aaPredicted RBP16.63■□□□□ 0.25
COL2A1-207ENST00000490609 CACNA1EQ15878 2313 aa16.63■□□□□ 0.25
COL2A1-207ENST00000490609 ZNF840PA6NDX5 716 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 LEFTY2O00292 366 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 TMEM191BP0C7N4 346 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 CCDC192P0DO97 292 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 PDCP20941 246 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 MPLP40238 635 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 DUOXA2Q1HG44 320 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 AASDHQ4L235 1098 aaPredicted RBP16.62■□□□□ 0.25
COL2A1-207ENST00000490609 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 VSTM1Q6UX27 236 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 MYCBPAPQ8TBZ2 947 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 PLEKHO2Q8TD55 490 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 ANKRD36BP1Q96IX9 119 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 INVSQ9Y283 1065 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 PCDHGA5Q9Y5G8 931 aa16.62■□□□□ 0.25
COL2A1-207ENST00000490609 LAMA5O15230 3695 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 FOXD2O60548 495 aaPredicted RBP16.61■□□□□ 0.25
COL2A1-207ENST00000490609 CASP1P29466 404 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 SLC6A11P48066 632 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 IFNAR2P48551 515 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 NOP14P78316 857 aaKnown RBP16.61■□□□□ 0.25
COL2A1-207ENST00000490609 SLC7A9P82251 487 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 AMPD2Q01433 879 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 DENND5BQ6ZUT9 1274 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 RASSF3Q86WH2 238 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
COL2A1-207ENST00000490609 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 AGPAT3Q9NRZ7 376 aa16.61■□□□□ 0.25
COL2A1-207ENST00000490609 FREM2Q5SZK8 3169 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 F8VP50 259 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 SCAMP3O14828 347 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 KIAA0391O15091 583 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 TACC1O75410 805 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 APBB3O95704 486 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 OAS1P00973 400 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 CYP17A1P05093 508 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 BCKDHBP21953 392 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 GRIK1P39086 918 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 TXLNAP40222 546 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 MYO1EQ12965 1108 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 MDH1BQ5I0G3 518 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 PAQR9Q6ZVX9 377 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 C12orf40Q86WS4 652 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 INTS4Q96HW7 963 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 ZFRQ96KR1 1074 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 C8orf48Q96LL4 319 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 CEP295NLQ96MC4 621 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 B3GNT5Q9BYG0 378 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
COL2A1-207ENST00000490609 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
COL2A1-207ENST00000490609 ZFYVE26Q68DK2 2539 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 A0A0A0MRY4 1105 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 CLDN5O00501 218 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 CLIC2O15247 247 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 TNNC2P02585 160 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 PTPN1P18031 435 aaKnown RBP16.59■□□□□ 0.25
COL2A1-207ENST00000490609 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
COL2A1-207ENST00000490609 PGFP49763 221 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 SEC13P55735 322 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 CYP27A1Q02318 531 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 CYP24A1Q07973 514 aa16.59■□□□□ 0.25
COL2A1-207ENST00000490609 TAF10Q12962 218 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms