RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
USP39-216ENST00000490193 FAM13AO94988 1023 aa8.8□□□□□ -1
USP39-216ENST00000490193 IL18RAPO95256 599 aa8.8□□□□□ -1
USP39-216ENST00000490193 NFATC1O95644 943 aa8.8□□□□□ -1
USP39-216ENST00000490193 CYP2F1P24903 491 aa8.8□□□□□ -1
USP39-216ENST00000490193 HOXD12P35452 270 aa8.8□□□□□ -1
USP39-216ENST00000490193 EIF2DP41214 584 aaKnown RBP8.8□□□□□ -1
USP39-216ENST00000490193 MAGEA11P43364 429 aa8.8□□□□□ -1
USP39-216ENST00000490193 PDE6CP51160 858 aa8.8□□□□□ -1
USP39-216ENST00000490193 PSMD2Q13200 908 aa8.8□□□□□ -1
USP39-216ENST00000490193 SEMA3BQ13214 749 aa8.8□□□□□ -1
USP39-216ENST00000490193 DDR2Q16832 855 aa8.8□□□□□ -1
USP39-216ENST00000490193 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
USP39-216ENST00000490193 SDHAF4Q5VUM1 108 aa8.8□□□□□ -1
USP39-216ENST00000490193 ADALQ6DHV7 355 aa8.8□□□□□ -1
USP39-216ENST00000490193 ANO7Q6IWH7 933 aa8.8□□□□□ -1
USP39-216ENST00000490193 LRSAM1Q6UWE0 723 aa8.8□□□□□ -1
USP39-216ENST00000490193 PIP4P1Q86T03 277 aa8.8□□□□□ -1
USP39-216ENST00000490193 GPBP1Q86WP2 473 aa8.8□□□□□ -1
USP39-216ENST00000490193 TMEM86AQ8N2M4 240 aa8.8□□□□□ -1
USP39-216ENST00000490193 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
USP39-216ENST00000490193 LRRC52Q8N7C0 313 aa8.8□□□□□ -1
USP39-216ENST00000490193 FSIP1Q8NA03 581 aa8.8□□□□□ -1
USP39-216ENST00000490193 STKLD1Q8NE28 680 aa8.8□□□□□ -1
USP39-216ENST00000490193 DEFB124Q8NES8 71 aa8.8□□□□□ -1
USP39-216ENST00000490193 SH3RF2Q8TEC5 729 aa8.8□□□□□ -1
USP39-216ENST00000490193 LRRC15Q8TF66 581 aa8.8□□□□□ -1
USP39-216ENST00000490193 HVCN1Q96D96 273 aa8.8□□□□□ -1
USP39-216ENST00000490193 CEP295NLQ96MC4 621 aa8.8□□□□□ -1
USP39-216ENST00000490193 CYP2S1Q96SQ9 504 aa8.8□□□□□ -1
USP39-216ENST00000490193 PLIN2Q99541 437 aa8.8□□□□□ -1
USP39-216ENST00000490193 SLC32A1Q9H598 525 aa8.8□□□□□ -1
USP39-216ENST00000490193 BLOC1S4Q9NUP1 217 aa8.8□□□□□ -1
USP39-216ENST00000490193 GDAP2Q9NXN4 497 aa8.8□□□□□ -1
USP39-216ENST00000490193 AGO2Q9UKV8 859 aaKnown RBP8.8□□□□□ -1
USP39-216ENST00000490193 L1RE1Q9UN81 338 aa8.8□□□□□ -1
USP39-216ENST00000490193 INVSQ9Y283 1065 aa8.8□□□□□ -1
USP39-216ENST00000490193 ADAMTS9Q9P2N4 1935 aa8.8□□□□□ -1
USP39-216ENST00000490193 CACNA1EQ15878 2313 aa8.79□□□□□ -1
USP39-216ENST00000490193 A0A0A0MRY4 1105 aa8.79□□□□□ -1
USP39-216ENST00000490193 C2orf78A6NCI8 922 aa8.79□□□□□ -1
USP39-216ENST00000490193 TISP43B9A030 160 aa8.79□□□□□ -1
USP39-216ENST00000490193 H0Y626 953 aa8.79□□□□□ -1
USP39-216ENST00000490193 GABRDO14764 452 aa8.79□□□□□ -1
USP39-216ENST00000490193 ALDH1A2O94788 518 aa8.79□□□□□ -1
USP39-216ENST00000490193 TRIM16O95361 564 aa8.79□□□□□ -1
USP39-216ENST00000490193 CAPNS1P04632 268 aa8.79□□□□□ -1
USP39-216ENST00000490193 HNRNPLP14866 589 aaKnown RBP eCLIP8.79□□□□□ -1
USP39-216ENST00000490193 DHPSP49366 369 aaPredicted RBP8.79□□□□□ -1
USP39-216ENST00000490193 ZXDBP98169 803 aa8.79□□□□□ -1
USP39-216ENST00000490193 MYL7Q01449 175 aa8.79□□□□□ -1
USP39-216ENST00000490193 KCNC4Q03721 635 aa8.79□□□□□ -1
USP39-216ENST00000490193 RING1Q06587 406 aa8.79□□□□□ -1
USP39-216ENST00000490193 KCNB1Q14721 858 aa8.79□□□□□ -1
USP39-216ENST00000490193 POSTNQ15063 836 aa8.79□□□□□ -1
USP39-216ENST00000490193 ZC2HC1CQ53FD0 456 aaPredicted RBP8.79□□□□□ -1
USP39-216ENST00000490193 C2orf27AQ580R0 203 aa8.79□□□□□ -1
USP39-216ENST00000490193 TRIM61Q5EBN2 209 aa8.79□□□□□ -1
USP39-216ENST00000490193 LMBRD2Q68DH5 695 aaPredicted RBP8.79□□□□□ -1
USP39-216ENST00000490193 SLC23A3Q6PIS1 610 aa8.79□□□□□ -1
USP39-216ENST00000490193 LPCAT2Q7L5N7 544 aa8.79□□□□□ -1
USP39-216ENST00000490193 SYT12Q8IV01 421 aa8.79□□□□□ -1
USP39-216ENST00000490193 ARL14EPQ8N8R7 260 aaPredicted RBP8.79□□□□□ -1
USP39-216ENST00000490193 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
USP39-216ENST00000490193 CXorf38Q8TB03 319 aa8.79□□□□□ -1
USP39-216ENST00000490193 PIGKQ92643 395 aa8.79□□□□□ -1
USP39-216ENST00000490193 CALML4Q96GE6 196 aa8.79□□□□□ -1
USP39-216ENST00000490193 SPATA17Q96L03 361 aa8.79□□□□□ -1
USP39-216ENST00000490193 FNBP1Q96RU3 617 aa8.79□□□□□ -1
USP39-216ENST00000490193 STRA6Q9BX79 667 aa8.79□□□□□ -1
USP39-216ENST00000490193 NUSAP1Q9BXS6 441 aaKnown RBP8.79□□□□□ -1
USP39-216ENST00000490193 LINC00597Q9H2U6 94 aa8.79□□□□□ -1
USP39-216ENST00000490193 TRPC7Q9HCX4 862 aa8.79□□□□□ -1
USP39-216ENST00000490193 DDX43Q9NXZ2 648 aaKnown RBP8.79□□□□□ -1
USP39-216ENST00000490193 GTF3C4Q9UKN8 822 aa8.79□□□□□ -1
USP39-216ENST00000490193 LOC400499M0QZD8 3231 aa8.79□□□□□ -1
USP39-216ENST00000490193 LAMA5O15230 3695 aa8.78□□□□□ -1
USP39-216ENST00000490193 ADAMTS20P59510 1910 aa8.78□□□□□ -1
USP39-216ENST00000490193 MYO18AQ92614 2054 aaKnown RBP8.78□□□□□ -1
USP39-216ENST00000490193 MYOFQ9NZM1 2061 aa8.78□□□□□ -1
USP39-216ENST00000490193 ANTXRLA6NF34 631 aa8.78□□□□□ -1
USP39-216ENST00000490193 TAF4O00268 1085 aa8.78□□□□□ -1
USP39-216ENST00000490193 HYAL3O43820 417 aaPredicted RBP8.78□□□□□ -1
USP39-216ENST00000490193 HUS1O60921 280 aa8.78□□□□□ -1
USP39-216ENST00000490193 TBCAO75347 108 aaKnown RBP8.78□□□□□ -1
USP39-216ENST00000490193 OLFM2O95897 454 aa8.78□□□□□ -1
USP39-216ENST00000490193 CYP17A1P05093 508 aa8.78□□□□□ -1
USP39-216ENST00000490193 ITGB3P05106 788 aa8.78□□□□□ -1
USP39-216ENST00000490193 ENGP17813 658 aa8.78□□□□□ -1
USP39-216ENST00000490193 HDCP19113 662 aa8.78□□□□□ -1
USP39-216ENST00000490193 PCSK1P29120 753 aa8.78□□□□□ -1
USP39-216ENST00000490193 ADSSP30520 456 aa8.78□□□□□ -1
USP39-216ENST00000490193 POLR2BP30876 1174 aaKnown RBP8.78□□□□□ -1
USP39-216ENST00000490193 KIR2DL1P43626 348 aaPredicted RBP8.78□□□□□ -1
USP39-216ENST00000490193 LHX1P48742 406 aa8.78□□□□□ -1
USP39-216ENST00000490193 SLC7A9P82251 487 aa8.78□□□□□ -1
USP39-216ENST00000490193 BYSLQ13895 437 aaKnown RBP8.78□□□□□ -1
USP39-216ENST00000490193 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
USP39-216ENST00000490193 UAP1L1Q3KQV9 507 aa8.78□□□□□ -1
USP39-216ENST00000490193 FAM171BQ6P995 826 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms