RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IL31RAQ8NI17 732 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 CYP2W1Q8TAV3 490 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 RUNDC1Q96C34 613 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 RSPRY1Q96DX4 576 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 LENG8Q96PV6 779 aaPredicted RBP4.75□□□□□ -1.65
HMGN1-218ENST00000490032 TRMT13Q9NUP7 481 aaKnown RBP4.75□□□□□ -1.65
HMGN1-218ENST00000490032 ZIM2Q9NZV7 527 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 SNX14Q9Y5W7 946 aa4.75□□□□□ -1.65
HMGN1-218ENST00000490032 TP73O15350 636 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 CYP2D6P10635 497 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 KITP10721 976 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 MPGP29372 298 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 PLA1AQ53H76 456 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 CEP78Q5JTW2 689 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 CXorf57Q6NSI4 855 aaKnown RBP4.74□□□□□ -1.65
HMGN1-218ENST00000490032 KIRREL2Q6UWL6 708 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 MAEAQ7L5Y9 396 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 YTHDF3Q7Z739 585 aaKnown RBP4.74□□□□□ -1.65
HMGN1-218ENST00000490032 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
HMGN1-218ENST00000490032 C8orf58Q8NAV2 365 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 MAML1Q92585 1016 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 DAZAP1Q96EP5 407 aaKnown RBP4.74□□□□□ -1.65
HMGN1-218ENST00000490032 RITA1Q96K30 269 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 ASB2Q96Q27 587 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 SNX18Q96RF0 628 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 B3GNT5Q9BYG0 378 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 MS4A7Q9GZW8 240 aaPredicted RBP4.74□□□□□ -1.65
HMGN1-218ENST00000490032 TMEM60Q9H2L4 133 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 NRIP3Q9NQ35 241 aa4.74□□□□□ -1.65
HMGN1-218ENST00000490032 TBC1D4O60343 1298 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 U2AF1L5P0DN76 240 aaPredicted RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 U2AF1Q01081 240 aaKnown RBP eCLIP4.73□□□□□ -1.651e-13■■■■■ 38.5
HMGN1-218ENST00000490032 SLC13A2Q13183 592 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 RAB32Q13637 225 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 LY6KQ17RY6 165 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 EPHA10Q5JZY3 1008 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 SLC9A4Q6AI14 798 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 SLC18B1Q6NT16 456 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 SWSAP1Q6NVH7 229 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 CAND1Q86VP6 1230 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 KIAA0319LQ8IZA0 1049 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 TERB1Q8NA31 727 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 PNLDC1Q8NA58 520 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 BPIFB1Q8TDL5 484 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 RPL36ALQ969Q0 106 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 NAF1Q96HR8 494 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 QTRT1Q9BXR0 403 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 BHMT2Q9H2M3 363 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 XPNPEP3Q9NQH7 507 aa4.73□□□□□ -1.65
HMGN1-218ENST00000490032 THRAP3Q9Y2W1 955 aaKnown RBP4.73□□□□□ -1.65
HMGN1-218ENST00000490032 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 POC1B-GALNT4F8VUJ3 575 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 CTNND1O60716 968 aaKnown RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 CHRM5P08912 532 aaPredicted RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 MYCLP12524 364 aaPredicted RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 SFPQP23246 707 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 E2F1Q01094 437 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 KLF9Q13886 244 aaPredicted RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 SUPT20HL1Q3ZLR7 823 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 FCRL6Q6DN72 434 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 GALNT16Q8N428 558 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 GALNT4Q8N4A0 578 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 PPP2R3CQ969Q6 453 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 SUCLG2Q96I99 432 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 PRR25Q96S07 402 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 SH2D3AQ9BRG2 576 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 DPCDQ9BVM2 203 aaPredicted RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 C22orf23Q9BZE7 217 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 ZNF518BQ9C0D4 1074 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 ZSCAN32Q9NX65 697 aa4.72□□□□□ -1.65
HMGN1-218ENST00000490032 CCNL1Q9UK58 526 aaPredicted RBP4.72□□□□□ -1.65
HMGN1-218ENST00000490032 CYP2D7A0A087X1C5 515 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 CAPN8A6NHC0 703 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 FAM227AF5H4B4 570 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 TBX3O15119 743 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 FRS3O43559 492 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 PDE8BO95263 885 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 VNN1O95497 513 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 SLC7A1P30825 629 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 PTGER1P34995 402 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 PRKAG1P54619 331 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 BCAT1P54687 386 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 CERCAMQ5T4B2 595 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 L1TD1Q5T7N2 865 aaKnown RBP4.71□□□□□ -1.66
HMGN1-218ENST00000490032 FAM102BQ5T8I3 360 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 MICU3Q86XE3 530 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 TMEM171Q8WVE6 324 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 RAPGEF4Q8WZA2 1011 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 C17orf80Q9BSJ5 609 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 PRSS22Q9GZN4 317 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 A1CFQ9NQ94 594 aaKnown RBP4.71□□□□□ -1.66
HMGN1-218ENST00000490032 RGS17Q9UGC6 210 aaPredicted RBP4.71□□□□□ -1.66
HMGN1-218ENST00000490032 L1RE1Q9UN81 338 aa4.71□□□□□ -1.66
HMGN1-218ENST00000490032 SMIM35A0A1B0GVV1 85 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 TCRBV5S1A1TA0A578 114 aa4.7□□□□□ -1.66
HMGN1-218ENST00000490032 TRIM43BA6NCK2 446 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms