RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 CSH1P0DML2 217 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 CSH2P0DML3 217 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 UCHL3P15374 230 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 GABRR2P28476 465 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 CYP4F8P98187 520 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 TEAD2Q15562 447 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 STXBP5Q5T5C0 1151 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 CYP4A22Q5TCH4 519 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 ARHGAP17Q68EM7 881 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 CLEC20AQ6ZU45 233 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 GPRIN1Q7Z2K8 1008 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.04
HLA-F-229ENST00000489502 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 IL21Q9HBE4 155 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 CD320Q9NPF0 282 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 ACP6Q9NPH0 428 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
HLA-F-229ENST00000489502 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.04
HLA-F-229ENST00000489502 TSPAN16Q9UKR8 245 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
HLA-F-229ENST00000489502 DENND4CQ5VZ89 1909 aa15.27■□□□□ 0.03
HLA-F-229ENST00000489502 A0A1B0GTH6 734 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 LRRC10BA6NIK2 292 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 LOC730098B7Z3J9 87 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 O00370 1275 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 PAEPP09466 180 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 VDRP11473 427 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 NPR3P17342 541 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 SLC5A3P53794 718 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 FANCCQ00597 558 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 POTEHQ6S545 545 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 DENND5BQ6ZUT9 1274 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 TTC30AQ86WT1 665 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 LEMD2Q8NC56 503 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 FGF13Q92913 245 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 SPATA17Q96L03 361 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 FAM81BQ96LP2 452 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 ERGIC2Q96RQ1 377 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 PLCB1Q9NQ66 1216 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
HLA-F-229ENST00000489502 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 RFX1P22670 979 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
HLA-F-229ENST00000489502 DRAP1Q14919 205 aaPredicted RBP15.25■□□□□ 0.03
HLA-F-229ENST00000489502 FILIP1LQ4L180 1135 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 SCAMP5Q8TAC9 235 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
HLA-F-229ENST00000489502 MCRS1Q96EZ8 462 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 GCNAQ96QF7 691 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 NAA15Q9BXJ9 866 aaKnown RBP15.25■□□□□ 0.03
HLA-F-229ENST00000489502 DUSP16Q9BY84 665 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 ATXN3LQ9H3M9 355 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 CSNK1G1Q9HCP0 422 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 CDH7Q9ULB5 785 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
HLA-F-229ENST00000489502 HHLA1C9JL84 531 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 F8VZ95 297 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 M0QYV0 167 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 TULP2O00295 520 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
HLA-F-229ENST00000489502 ZNF197O14709 1029 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 CYP26A1O43174 497 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 THAP12O43422 761 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 MICAL2O94851 1124 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 ASGR2P07307 311 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 CDC25CP30307 473 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 GNA15P30679 374 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 BCAT1P54687 386 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 GJD3Q8N144 294 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 UBA3Q8TBC4 463 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 TRMT2BQ96GJ1 504 aaKnown RBP15.24■□□□□ 0.03
HLA-F-229ENST00000489502 MYRFLQ96LU7 910 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 TTLL2Q9BWV7 592 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 IFNKQ9P0W0 207 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 HESX1Q9UBX0 185 aa15.24■□□□□ 0.03
HLA-F-229ENST00000489502 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.24■□□□□ 0.03
HLA-F-229ENST00000489502 NUP210Q8TEM1 1887 aaPredicted RBP15.24■□□□□ 0.03
HLA-F-229ENST00000489502 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 LAMP2P13473 410 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 PDE4CQ08493 712 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 GPR158Q5T848 1215 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 PIGZQ86VD9 579 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 NUP93Q8N1F7 819 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 ANKRD52Q8NB46 1076 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 FBXO32Q969P5 355 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 ZSWIM3Q96MP5 696 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
HLA-F-229ENST00000489502 EPS15L1Q9UBC2 864 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 UXTQ9UBK9 157 aaPredicted RBP15.23■□□□□ 0.03
HLA-F-229ENST00000489502 LIMD1Q9UGP4 676 aa15.23■□□□□ 0.03
HLA-F-229ENST00000489502 MYO10Q9HD67 2058 aa15.22■□□□□ 0.03
HLA-F-229ENST00000489502 RTN3O95197 1032 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms