RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 B3GAT3O94766 335 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ZFYP08048 801 aaPredicted RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ABCB4P21439 1286 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 SLC6A4P31645 630 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 IFNAR2P48551 515 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 NUCB1Q02818 461 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ZNF268Q14587 947 aaPredicted RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 EIF2S3LQ2VIR3 472 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 GDF7Q7Z4P5 450 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 SRGAP1Q7Z6B7 1085 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 SGMS1Q86VZ5 419 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 HACE1Q8IYU2 909 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ARL14Q8N4G2 192 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 TTC13Q8NBP0 860 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 MRGPRX1Q96LB2 322 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 CEP89Q96ST8 783 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ANP32EQ9BTT0 268 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 SLC6A17Q9H1V8 727 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 CRISPLD1Q9H336 500 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 RIOX1Q9H6W3 641 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 TM9SF3Q9HD45 589 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 USP36Q9P275 1121 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 SUCLA2Q9P2R7 463 aaPredicted RBP8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 GABBR1Q9UBS5 961 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ASB3Q9Y575 518 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 CROCCQ5TZA2 2017 aa8.22□□□□□ -1.09
EXOSC3-206ENST00000489414 ZBTB24O43167 697 aaPredicted RBP8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 TRAPPC3O43617 180 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 TRAK2O60296 914 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 OPA1O60313 960 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 APODP05090 189 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 CDC25CP30307 473 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 TNFSF9P41273 254 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 TNFRSF4P43489 277 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 BRCC3P46736 316 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 DNM2P50570 870 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 HDAC4P56524 1084 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 ZNF77Q15935 545 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 ISXQ2M1V0 245 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 SFMBT2Q5VUG0 894 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 NOTUMQ6P988 496 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 TRMT11Q7Z4G4 463 aaKnown RBP8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 CHD1LQ86WJ1 897 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 MAB21L3Q8N8X9 362 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 C3orf58Q8NDZ4 430 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 KCNV2Q8TDN2 545 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 IPO4Q8TEX9 1081 aaKnown RBP8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 PNKPQ96T60 521 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 ELF4Q99607 663 aaPredicted RBP8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 PTPRHQ9HD43 1115 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 MAD2L2Q9UI95 211 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 ACSL6Q9UKU0 697 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 DOCK9Q9BZ29 2069 aa8.21□□□□□ -1.1
EXOSC3-206ENST00000489414 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 H7C4K7 107 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 CYTH3O43739 400 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 TSPAN1O60635 241 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 TSPAN3O60637 253 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 WNT1P04628 370 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 THP07101 528 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 ITGA2BP08514 1039 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 EPHA8P29322 1005 aaPredicted RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 AXLP30530 894 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 SLC6A11P48066 632 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 PRKCEQ02156 737 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 PRAMEF14Q5SWL7 426 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 ANKRD45Q5TZF3 282 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 SP5Q6BEB4 398 aaPredicted RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 METTL3Q86U44 580 aaKnown RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 SGPP1Q9BX95 441 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 TRIM6Q9C030 488 aaPredicted RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 GSX1Q9H4S2 264 aaPredicted RBP8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 C1orf115Q9H7X2 142 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 NRBP2Q9NSY0 501 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 NUMA1Q14980 2115 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 ANK2Q01484 3957 aa8.2□□□□□ -1.1
EXOSC3-206ENST00000489414 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 MYOFQ9NZM1 2061 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 MYMKA6NI61 221 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 PRR19A6NJB7 356 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 KCNJ18B7U540 433 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 SYN3O14994 580 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 YKT6O15498 198 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 TNFSF15O95150 251 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 NFATC1O95644 943 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 PSAPP07602 524 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 THEGLP0DJG4 465 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 RARGP13631 454 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 DDX6P26196 483 aaKnown RBP eCLIP8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 SMARCA1P28370 1054 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 GRIA2P42262 883 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 ALDH1A3P47895 512 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 CLCNKBP51801 687 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 BECN1Q14457 450 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms