RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 ZNF852Q6ZMS4 543 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 MON1AQ86VX9 555 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 CMTM8Q8IZV2 173 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 MAB21L3Q8N8X9 362 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 FBXL13Q8NEE6 735 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 BPIFB1Q8TDL5 484 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 NELL2Q99435 816 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 SLC46A2Q9BY10 475 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 NIF3L1Q9GZT8 377 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 KIF9Q9HAQ2 790 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 TRPV5Q9NQA5 729 aa14.36□□□□□ -0.11
LMO4-203ENST00000489303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.11
LMO4-203ENST00000489303 SPATA6Q9NWH7 488 aaPredicted RBP14.36□□□□□ -0.11
LMO4-203ENST00000489303 ARMCX3Q9UH62 379 aaPredicted RBP14.36□□□□□ -0.11
LMO4-203ENST00000489303 DNAH14Q0VDD8 3507 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 DMXL1Q9Y485 3027 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ZNF292O60281 2723 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TRIM49BA6NDI0 452 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 F8VP50 259 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 BIN1O00499 593 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ASPAP45381 313 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 PPP3CCP48454 512 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 NDST1P52848 882 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 PMS1P54277 932 aaKnown RBP14.35□□□□□ -0.11
LMO4-203ENST00000489303 MCCD1P59942 119 aaPredicted RBP14.35□□□□□ -0.11
LMO4-203ENST00000489303 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 FCHO2Q0JRZ9 810 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 MORC3Q14149 939 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TXNDC8Q6A555 127 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ACOT1Q86TX2 421 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ZC3H3Q8IXZ2 948 aaKnown RBP14.35□□□□□ -0.11
LMO4-203ENST00000489303 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TTC39CQ8N584 583 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TRIML1Q8N9V2 468 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 NELFBQ8WX92 580 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ELMO3Q96BJ8 720 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 FAXDC2Q96IV6 333 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 OSBPL6Q9BZF3 934 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 ZNF518BQ9C0D4 1074 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 SDCBP2Q9H190 292 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TRPC7Q9HCX4 862 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 RAB20Q9NX57 234 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 NME7Q9Y5B8 376 aa14.35□□□□□ -0.11
LMO4-203ENST00000489303 EP300Q09472 2414 aaPredicted RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 TRAV19A0A0A6YYK7 116 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 CLDN5O00501 218 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 USP17L7P0C7H9 530 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 KPNA1P52294 538 aaPredicted RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 CSTF1Q05048 431 aaKnown RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 CETN1Q12798 172 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 CC2D1AQ6P1N0 951 aaPredicted RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 TMEM150AQ86TG1 271 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 CRYBG2Q8N1P7 616 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 SUMF1Q8NBK3 374 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 MSANTD3Q96H12 275 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 SLITRK1Q96PX8 696 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 NT5C1AQ9BXI3 368 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 BCO2Q9BYV7 579 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 DMAP1Q9NPF5 467 aaPredicted RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 TDP1Q9NUW8 608 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 KIAA1468Q9P260 1216 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 NDRG2Q9UN36 371 aaKnown RBP14.34□□□□□ -0.11
LMO4-203ENST00000489303 CTNND2Q9UQB3 1225 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 TICRRQ7Z2Z1 1910 aa14.34□□□□□ -0.11
LMO4-203ENST00000489303 AP1G2O75843 785 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 CKMP06732 381 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 CD44P16070 742 aaKnown RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 PFKLP17858 780 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 CD58P19256 250 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 HOXC13P31276 330 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 MAGEA9P43362 315 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 ID4P47928 161 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 INCA1Q0VD86 236 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 PAK1Q13153 545 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 ZNF268Q14587 947 aaPredicted RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 CAMK4Q16566 473 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 NUP93Q8N1F7 819 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 SMG9Q9H0W8 520 aaKnown RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 FAM124BQ9H5Z6 455 aaPredicted RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
LMO4-203ENST00000489303 PIAS3Q9Y6X2 628 aa14.33□□□□□ -0.12
LMO4-203ENST00000489303 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
LMO4-203ENST00000489303 GNA14O95837 355 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms