RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 BOD1Q96IK1 185 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 TBATAQ96M53 351 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 PAGR1Q9BTK6 254 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 ZNF768Q9H5H4 540 aaKnown RBP5.07□□□□□ -1.6
XRN1-213ENST00000489241 AS3MTQ9HBK9 375 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 TERF2IPQ9NYB0 399 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 RRN3Q9NYV6 651 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 ZNF212Q9UDV6 495 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 CDYLQ9Y232 598 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
XRN1-213ENST00000489241 LRRFIP2Q9Y608 721 aaKnown RBP5.07□□□□□ -1.6
XRN1-213ENST00000489241 AATKQ6ZMQ8 1374 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 CCDC195A0A1B0GUA6 201 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 E7ENX8 843 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MYO1CO00159 1063 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 POLRMTO00411 1230 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 TRIM38O00635 465 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 NCR1O76036 304 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 NDUFA10O95299 355 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 CFIP05156 583 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 IL1R2P27930 398 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 TAP2Q03519 686 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 OCA2Q04671 838 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 KRTAP1-1Q07627 177 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 LMOD3Q0VAK6 560 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 TCF15Q12870 199 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 PRKG1Q13976 671 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MAPRE1Q15691 268 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 HECTD2Q5U5R9 776 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 FAM160B1Q5W0V3 765 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 ZDHHC24Q6UX98 284 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 CLNKQ7Z7G1 428 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 CPEB3Q8NE35 698 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 IL17REQ8NFR9 667 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 STYXQ8WUJ0 223 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 SPSB4Q96A44 273 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MOGAT1Q96PD6 335 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 TRIB1Q96RU8 372 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 NELL2Q99435 816 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 EIF2AK1Q9BQI3 630 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 ZSWIM1Q9BR11 485 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 TLR10Q9BXR5 811 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 TEX101Q9BY14 249 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MAGEB5Q9BZ81 275 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MS4A7Q9GZW8 240 aaPredicted RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 NECTIN3Q9NQS3 549 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MRPS18AQ9NVS2 196 aaKnown RBP5.06□□□□□ -1.6
XRN1-213ENST00000489241 RGL1Q9NZL6 768 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 XPR1Q9UBH6 696 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 KCNE5Q9UJ90 142 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 MID2Q9UJV3 735 aa5.06□□□□□ -1.6
XRN1-213ENST00000489241 CENPVL1A0A0U1RR11 272 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 MYADML2A6NDP7 307 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 PRRT4C9JH25 899 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 E9PLN8 166 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 M0QYG6 137 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 PIP5K1BO14986 540 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 KCNQ3O43525 872 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 RASSF9O75901 435 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 SOAT2O75908 522 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 PYGLP06737 847 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 ELANEP08246 267 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 KCNA2P16389 499 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 FDXRP22570 491 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 ARL4CP56559 192 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 FAM189BP81408 668 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 FPGSQ05932 587 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 RESTQ13127 1097 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
XRN1-213ENST00000489241 TAF5Q15542 800 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 SLC4A8Q2Y0W8 1093 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 BEAN1Q3B7T3 259 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 JAKMIP3Q5VZ66 844 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.05□□□□□ -1.6
XRN1-213ENST00000489241 SLC30A10Q6XR72 485 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 KRT28Q7Z3Y7 464 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 PPP1R32Q7Z5V6 425 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 COLGALT2Q8IYK4 626 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 FAM46DQ8NEK8 389 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 GPR150Q8NGU9 434 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 FAM71BQ8TC56 605 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 IPCEF1Q8WWN9 437 aaPredicted RBP5.05□□□□□ -1.6
XRN1-213ENST00000489241 SNX27Q96L92 541 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 UBXN10Q96LJ8 280 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 VKORC1Q9BQB6 163 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 SENP7Q9BQF6 1050 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 SPATA5L1Q9BVQ7 753 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 ALOXE3Q9BYJ1 711 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 TOR3AQ9H497 397 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 GALNT9Q9HCQ5 603 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 HSFX1Q9UBD0 423 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 GJD2Q9UKL4 321 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 TBC1D30Q9Y2I9 924 aa5.05□□□□□ -1.6
XRN1-213ENST00000489241 MAP3K2Q9Y2U5 619 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms