RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 SHC3Q92529 594 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
COL4A5-206ENST00000489230 GCNAQ96QF7 691 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
COL4A5-206ENST00000489230 ZNF518BQ9C0D4 1074 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 GDE1Q9NZC3 331 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 HMGXB4Q9UGU5 601 aa13.18□□□□□ -0.3
COL4A5-206ENST00000489230 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 TMEM221A6NGB7 291 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 SLC38A8A6NNN8 435 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 F8VP50 259 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 M0R296 226 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
COL4A5-206ENST00000489230 CLDN5O00501 218 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 NOL4O94818 638 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 ATF6P18850 670 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 ADORA2BP29275 332 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 ZNF132P52740 706 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 ORC1Q13415 861 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 ARHGAP15Q53QZ3 475 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
COL4A5-206ENST00000489230 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 FAM71AQ8IYT1 594 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 KAT5Q92993 513 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
COL4A5-206ENST00000489230 EDEM3Q9BZQ6 932 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 FBXO44Q9H4M3 255 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 POMKQ9H5K3 350 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 FAM207AQ9NSI2 230 aaPredicted RBP13.17□□□□□ -0.3
COL4A5-206ENST00000489230 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
COL4A5-206ENST00000489230 RNF225M0QZC1 329 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 SOAT2O75908 522 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 MYL4P12829 197 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 CCDC130P13994 396 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 NPR3P17342 541 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 PFKLP17858 780 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 PDE6CP51160 858 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 SNX16P57768 344 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 DRAP1Q14919 205 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 MEA1Q16626 185 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 DPY19L2P1Q6NXN4 242 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 GJB7Q6PEY0 223 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 OVCA2Q8WZ82 227 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 NAP1L5Q96NT1 182 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
COL4A5-206ENST00000489230 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
COL4A5-206ENST00000489230 TECTAO75443 2155 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 LAMP2P13473 410 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
COL4A5-206ENST00000489230 YWHAQP27348 245 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 GNA15P30679 374 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 KRT9P35527 623 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 STAT1P42224 750 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 CDR1P51861 262 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 BCAT1P54687 386 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
COL4A5-206ENST00000489230 ZXDAP98168 799 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 BST2Q10589 180 aaKnown RBP13.15□□□□□ -0.3
COL4A5-206ENST00000489230 PRSS36Q5K4E3 855 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 IER5LQ5T953 404 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 TDRD5Q8NAT2 981 aaKnown RBP13.15□□□□□ -0.3
COL4A5-206ENST00000489230 GPR152Q8TDT2 470 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
COL4A5-206ENST00000489230 MRPS31Q92665 395 aaKnown RBP13.15□□□□□ -0.3
COL4A5-206ENST00000489230 E2F7Q96AV8 911 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms