RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 CBWD6Q4V339 395 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 DCAF17Q5H9S7 520 aaPredicted RBP22.5■■□□□ 1.19
LIME1-207ENST00000489212 CBWD3Q5JTY5 395 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 CBWD5Q5RIA9 395 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 TTI2Q6NXR4 508 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 UNC93AQ86WB7 457 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 FUKQ8N0W3 1084 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 CELF5Q8N6W0 485 aaKnown RBP22.5■■□□□ 1.19
LIME1-207ENST00000489212 BPIFB1Q8TDL5 484 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 KCNK16Q96T55 309 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 NIF3L1Q9GZT8 377 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 TRPC7Q9HCX4 862 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 FAM86C1Q9NVL1 165 aa22.5■■□□□ 1.19
LIME1-207ENST00000489212 C2orf78A6NCI8 922 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 FAM170BA6NMN3 283 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 CCDC130P13994 396 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 TCERG1LQ5VWI1 586 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 C12orf29Q8N999 325 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 FBXL13Q8NEE6 735 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 WHAMMQ8TF30 809 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 NELFBQ8WX92 580 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 CYP2S1Q96SQ9 504 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 MED10Q9BTT4 135 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 CYP3A43Q9HB55 503 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 RAB20Q9NX57 234 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 GCNT4Q9P109 453 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 PIAS3Q9Y6X2 628 aa22.49■■□□□ 1.19
LIME1-207ENST00000489212 VPS13AQ96RL7 3174 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 STX10O60499 249 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 PPP1R2P41236 205 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 FZD5Q13467 585 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 CAMK4Q16566 473 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 ARHGAP29Q52LW3 1261 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 ZNF852Q6ZMS4 543 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 ZNF687Q8N1G0 1237 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 SLC2A14Q8TDB8 520 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 SLC35C1Q96A29 364 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 CEP63Q96MT8 703 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 OSBPL6Q9BZF3 934 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 FAM49BQ9NUQ9 324 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 TDP1Q9NUW8 608 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 ARMCX3Q9UH62 379 aaPredicted RBP22.48■■□□□ 1.19
LIME1-207ENST00000489212 CTNND2Q9UQB3 1225 aa22.48■■□□□ 1.19
LIME1-207ENST00000489212 CILPO75339 1184 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 CD58P19256 250 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 SOX9P48436 509 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 TNK2Q07912 1038 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 ZNF268Q14587 947 aaPredicted RBP22.47■■□□□ 1.19
LIME1-207ENST00000489212 FILIP1Q7Z7B0 1213 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 ARL14EPQ8N8R7 260 aaPredicted RBP22.47■■□□□ 1.19
LIME1-207ENST00000489212 CCDC150Q8NCX0 1101 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 ZMIZ2Q8NF64 920 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 TTC8Q8TAM2 541 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 CSGALNACT1Q8TDX6 532 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 ATOH1Q92858 354 aaPredicted RBP22.47■■□□□ 1.19
LIME1-207ENST00000489212 TATDN2Q93075 761 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 SMARCD1Q96GM5 515 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 SMOQ99835 787 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 KRT82Q9NSB4 513 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 GTSE1Q9NYZ3 720 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 KIAA1468Q9P260 1216 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 COQ4Q9Y3A0 265 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 ATP8B3O60423 1300 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 MYH10P35580 1976 aa22.47■■□□□ 1.19
LIME1-207ENST00000489212 TRAV19A0A0A6YYK7 116 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 ZNF840PA6NDX5 716 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 TNFRSF10BO14763 440 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 AP1G2O75843 785 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 BEST1O76090 585 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 STX17P56962 302 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 TAF10Q12962 218 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 ANGPT1Q15389 498 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 NUP93Q8N1F7 819 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 ARID3AQ99856 593 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 NT5C1AQ9BXI3 368 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 KIF9Q9HAQ2 790 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 DMAP1Q9NPF5 467 aaPredicted RBP22.46■■□□□ 1.19
LIME1-207ENST00000489212 TRPM5Q9NZQ8 1165 aa22.46■■□□□ 1.19
LIME1-207ENST00000489212 USP34Q70CQ2 3546 aa22.45■■□□□ 1.19
LIME1-207ENST00000489212 MAN2B1O00754 1011 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 USP17L7P0C7H9 530 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 PLCB2Q00722 1185 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 IFRD2Q12894 506 aaPredicted RBP22.45■■□□□ 1.18
LIME1-207ENST00000489212 FOXR2Q6PJQ5 311 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 FRMD5Q7Z6J6 570 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 SCAMP5Q8TAC9 235 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 FAM3CQ92520 227 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 CLDN23Q96B33 292 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 NELL2Q99435 816 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 FAM83CQ9BQN1 747 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 IRF2BPLQ9H1B7 796 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 METTL14Q9HCE5 456 aaKnown RBP22.45■■□□□ 1.18
LIME1-207ENST00000489212 GKN1Q9NS71 199 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 EHD2Q9NZN4 543 aa22.45■■□□□ 1.18
LIME1-207ENST00000489212 NDRG2Q9UN36 371 aaKnown RBP22.45■■□□□ 1.18
LIME1-207ENST00000489212 MRPS17Q9Y2R5 130 aaKnown RBP22.45■■□□□ 1.18
LIME1-207ENST00000489212 BICDL2A1A5D9 508 aa22.44■■□□□ 1.18
LIME1-207ENST00000489212 CKMP06732 381 aa22.44■■□□□ 1.18
LIME1-207ENST00000489212 YWHAQP27348 245 aa22.44■■□□□ 1.18
LIME1-207ENST00000489212 ADORA2BP29275 332 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms