RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CCR9P51686 369 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SESN2P58004 480 aaPredicted RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 RNASE9P60153 205 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TLE1Q04724 770 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PPARAQ07869 468 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 NFATC3Q12968 1075 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TARDBPQ13148 414 aaKnown RBP eCLIP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SNAPC2Q13487 334 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 BAK1Q16611 211 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM71Q2Q1W2 868 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CTXN3Q4LDR2 81 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 FLYWCH1Q4VC44 716 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 KHDC1Q4VXA5 237 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ARHGAP15Q53QZ3 475 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TEPPQ6URK8 271 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 MFSD6Q6ZSS7 791 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 EP400NLQ6ZTU2 488 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 RALYLQ86SE5 291 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 MRGPRGQ86SM5 289 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PPP1R3BQ86XI6 285 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PROSER1Q86XN7 944 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 FAM90A1Q86YD7 464 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ERC1Q8IUD2 1116 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TRIM48Q8IWZ4 208 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 NAT8LQ8N9F0 302 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 MSANTD4Q8NCY6 345 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CEP70Q8NHQ1 597 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CLEC4DQ8WXI8 215 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CFHR4Q92496 578 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 RUBCNQ92622 972 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CLPTM1LQ96KA5 538 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 COG8Q96MW5 612 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 GBP4Q96PP9 640 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TUBGCP5Q96RT8 1024 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TMEM209Q96SK2 561 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 C7orf25Q9BPX7 421 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 GPATCH1Q9BRR8 931 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 DESI2Q9BSY9 194 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ABCG4Q9H172 646 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 OR10A4Q9H209 315 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ABHD16BQ9H3Z7 469 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SARS2Q9NP81 518 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 SACM1LQ9NTJ5 587 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 TMOD4Q9NZQ9 345 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 BTBD7Q9P203 1132 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 ADD3Q9UEY8 706 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 RRP7AQ9Y3A4 280 aaKnown RBP3.78□□□□□ -1.8
PRPF4-203ENST00000488937 PAXBP1Q9Y5B6 917 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 CYP46A1Q9Y6A2 500 aa3.78□□□□□ -1.8
PRPF4-203ENST00000488937 FLT1P17948 1338 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 RUSC2Q8N2Y8 1516 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 hCG_1807616A0A1W2PRN6 198 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 H3BNC9 293 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ACOT7O00154 380 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 UBE2CO00762 179 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 CLGNO14967 610 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 SPTLC2O15270 562 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 OPHN1O60890 802 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ERAL1O75616 437 aaKnown RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ACTL6BO94805 426 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 LAMP2P13473 410 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 EGR1P18146 543 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 MALP21145 153 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 COMTP21964 271 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ABCD3P28288 659 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 TM4SF1P30408 202 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ACSL1P33121 698 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 MLH1P40692 756 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 TNNT3P45378 269 aaPredicted RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ZNF131P52739 623 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 MRPS21P82921 87 aaKnown RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 CREB5Q02930 508 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 SLC12A1Q13621 1099 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 RAB39AQ14964 217 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 WTAPQ15007 396 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 SMAD1Q15797 465 aaKnown RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 KHDC1LQ5JSQ8 128 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 EPHA10Q5JZY3 1008 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 CCDC158Q5M9N0 1113 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 BTBD8Q5XKL5 378 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 KAZNQ674X7 775 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 MFSD5Q6N075 450 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 KLHL17Q6TDP4 642 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 KIAA0408Q6ZU52 694 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 GAREM2Q75VX8 874 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 RASGRP2Q7LDG7 609 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 KRT28Q7Z3Y7 464 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 CHD1LQ86WJ1 897 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 GATAD2AQ86YP4 633 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 SLC44A2Q8IWA5 706 aaPredicted RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 ADSSL1Q8N142 457 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 CDYL2Q8N8U2 506 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 OR6Y1Q8NGX8 325 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 SCAMP5Q8TAC9 235 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 IFI44Q8TCB0 444 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 BRIX1Q8TDN6 353 aaKnown RBP3.77□□□□□ -1.81
PRPF4-203ENST00000488937 TBC1D22AQ8WUA7 517 aa3.77□□□□□ -1.81
PRPF4-203ENST00000488937 AFG1LQ8WV93 481 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms