RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SLC44A4Q53GD3 710 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 L1TD1Q5T7N2 865 aaKnown RBP5.9□□□□□ -1.46
PTPN4-212ENST00000488896 PRAMEF17Q5VTA0 474 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 APOA5Q6Q788 366 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 ZDHHC24Q6UX98 284 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 Q6ZWC4 215 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 CAND1Q86VP6 1230 aaKnown RBP5.9□□□□□ -1.46
PTPN4-212ENST00000488896 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 IZUMO1Q8IYV9 350 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 KIAA0319LQ8IZA0 1049 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 ABRAQ8N0Z2 381 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 SEMA6DQ8NFY4 1073 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 MAML1Q92585 1016 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 DPH1Q9BZG8 443 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 FAM204AQ9H8W3 233 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 TRMT13Q9NUP7 481 aaKnown RBP5.9□□□□□ -1.46
PTPN4-212ENST00000488896 STK32BQ9NY57 414 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 TPCN1Q9ULQ1 816 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 AP4M1O00189 453 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 EXOC3O60645 756 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 RASSF9O75901 435 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 CTGFP29279 349 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 MPGP29372 298 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 ITGA8P53708 1063 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 SLC10A2Q12908 348 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-212ENST00000488896 PROSER3Q2NL68 480 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 C3orf38Q5JPI3 329 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 CACHD1Q5VU97 1274 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 SLC9A4Q6AI14 798 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 CCDC149Q6ZUS6 474 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 TCEAL8Q8IYN2 117 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 SPARTQ8N0X7 666 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 ABHD11Q8NFV4 315 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 OR56A3Q8NH54 315 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 CYP2W1Q8TAV3 490 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 C17orf80Q9BSJ5 609 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 FSD1LQ9BXM9 530 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 STK31Q9BXU1 1019 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 ZNF518BQ9C0D4 1074 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 RNF7Q9UBF6 113 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 L1RE1Q9UN81 338 aa5.89□□□□□ -1.47
PTPN4-212ENST00000488896 WDR91A4D1P6 747 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 VSTM5A8MXK1 200 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 MYO1FO00160 1098 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 TSPAN6O43657 245 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 RASAL1O95294 804 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 CELA2AP08217 269 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 CYP2D6P10635 497 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 E2F1Q01094 437 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 NXNQ6DKJ4 435 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 KCTD20Q7Z5Y7 419 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 VGLL2Q8N8G2 317 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 PNLDC1Q8NA58 520 aaKnown RBP5.88□□□□□ -1.47
PTPN4-212ENST00000488896 RP9Q8TA86 221 aaKnown RBP5.88□□□□□ -1.47
PTPN4-212ENST00000488896 DNAJB14Q8TBM8 379 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 SOCS4Q8WXH5 440 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 TSR2Q969E8 191 aaKnown RBP5.88□□□□□ -1.47
PTPN4-212ENST00000488896 SUCLG2Q96I99 432 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 SH2D3AQ9BRG2 576 aa5.88□□□□□ -1.47
PTPN4-212ENST00000488896 A1CFQ9NQ94 594 aaKnown RBP5.88□□□□□ -1.47
PTPN4-212ENST00000488896 TISP43B9A030 160 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 H7C4K7 107 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 RGS10O43665 173 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 SRGAP2O75044 1071 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 MAP4K4O95819 1239 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-212ENST00000488896 HOXA4Q00056 320 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-212ENST00000488896 EZH2Q15910 746 aaKnown RBP5.87□□□□□ -1.47
PTPN4-212ENST00000488896 TBC1D25Q3MII6 688 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 RNF220Q5VTB9 566 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 ZNF66Q6ZN08 573 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 FAM156AQ8NDB6 213 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 SPSB4Q96A44 273 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 LENG8Q96PV6 779 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-212ENST00000488896 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 HDAC9Q9UKV0 1011 aa5.87□□□□□ -1.47
PTPN4-212ENST00000488896 PYCARD-AS1I3L0S3 204 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 DLDP09622 509 aaKnown RBP5.86□□□□□ -1.47
PTPN4-212ENST00000488896 FPR3P25089 353 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 PRKAR1BP31321 381 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 GRM3Q14832 879 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 CNGA2Q16280 664 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 CYP1B1Q16678 543 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 KIAA0753Q2KHM9 967 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 TRIM72Q6ZMU5 477 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 CHSY1Q86X52 802 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 MICU3Q86XE3 530 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 ANKRD13AQ8IZ07 590 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 LRTOMTQ8WZ04 291 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 DAZAP1Q96EP5 407 aaKnown RBP5.86□□□□□ -1.47
PTPN4-212ENST00000488896 PRR25Q96S07 402 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 OGDHLQ9ULD0 1010 aa5.86□□□□□ -1.47
PTPN4-212ENST00000488896 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-212ENST00000488896 TRIM43BA6NCK2 446 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 PRRT4C9JH25 899 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 PSMD9O00233 223 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 CES2O00748 559 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 PRR35P0CG20 571 aa5.85□□□□□ -1.47
PTPN4-212ENST00000488896 EPHB2P29323 1055 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms