RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	MSANTD3	Q96H12	275 aa		18.21	■□□□□ 0.51
SUN1-233	ENST00000488628	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
SUN1-233	ENST00000488628	ZSCAN32	Q9NX65	697 aa		18.21	■□□□□ 0.51
SUN1-233	ENST00000488628	TRAF3IP3	Q9Y228	551 aa		18.21	■□□□□ 0.51
SUN1-233	ENST00000488628	MYO16	Q9Y6X6	1858 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	TRAV19	A0A0A6YYK7	116 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	CALU	O43852	315 aa	Predicted RBP	18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	KIN	O60870	393 aa	Known RBP	18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	LILRB5	O75023	590 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	AP3M2	P53677	418 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	ZXDB	P98169	803 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	ZNF77	Q15935	545 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	ZACN	Q401N2	412 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	ZNF667	Q5HYK9	610 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	NAIF1	Q69YI7	327 aa	Predicted RBP	18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	PAQR9	Q6ZVX9	377 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	SV2A	Q7L0J3	742 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	TMC2	Q8TDI7	906 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	ATRIP	Q8WXE1	791 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	C8orf48	Q96LL4	319 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	TTLL2	Q9BWV7	592 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	KIF9	Q9HAQ2	790 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	PCDHGA2	Q9Y5H1	932 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	CEP250	Q9BV73	2442 aa		18.2	■□□□□ 0.5
SUN1-233	ENST00000488628	TRIM66	O15016	1216 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	AKAP3	O75969	853 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	CLSTN1	O94985	981 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	CKM	P06732	381 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	USP17L7	P0C7H9	530 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	HDC	P19113	662 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	ANXA13	P27216	316 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	FAM160A1	Q05DH4	1040 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	DMWD	Q09019	674 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	ORC1	Q13415	861 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	CCIN	Q13939	588 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	KCNB1	Q14721	858 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	MTF1	Q14872	753 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	C1orf228	Q6PIY5	440 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	SMYD4	Q8IYR2	804 aa	Predicted RBP	18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	KCNK16	Q96T55	309 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	HMGXB4	Q9UGU5	601 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	WNT6	Q9Y6F9	365 aa		18.19	■□□□□ 0.5
SUN1-233	ENST00000488628	SDK1	Q7Z5N4	2213 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	ZNF840P	A6NDX5	716 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	HLA-DRA	P01903	254 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	TRIM49	P0CI25	452 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	TRIM49C	P0CI26	452 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	NR2F2	P24468	414 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	CXCL12	P48061	93 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	NOP14	P78316	857 aa	Known RBP	18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	IFRD2	Q12894	506 aa	Predicted RBP	18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	TAF10	Q12962	218 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	USP4	Q13107	963 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	PNOC	Q13519	176 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	LRRC32	Q14392	662 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	DGKK	Q5KSL6	1271 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	FSTL4	Q6MZW2	842 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	PKN3	Q6P5Z2	889 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	ACOT1	Q86TX2	421 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	GUF1	Q8N442	669 aa	Known RBP	18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	SPEM1	Q8N4L4	309 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	SH3RF2	Q8TEC5	729 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	CCDC47	Q96A33	483 aa	Known RBP	18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	IER2	Q9BTL4	223 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	ELOVL4	Q9GZR5	314 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	RNF38	Q9H0F5	515 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	LINC00597	Q9H2U6	94 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	TRPM5	Q9NZQ8	1165 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	FRMD4B	Q9Y2L6	1034 aa		18.18	■□□□□ 0.5
SUN1-233	ENST00000488628	IKBKB	O14920	756 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	ASS1	P00966	412 aa	Known RBP	18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	ASPA	P45381	313 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	CCR3	P51677	355 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	VAMP7	P51809	220 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	PPP3CA	Q08209	521 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	NFIL3	Q16649	462 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	SGSM1	Q2NKQ1	1148 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	ZCWPW2	Q504Y3	356 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	OSCP1	Q8WVF1	389 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	EEF2KMT	Q96G04	330 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	CEP295NL	Q96MC4	621 aa		18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	APOBEC3G	Q9HC16	384 aa	Known RBP	18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	DUS2	Q9NX74	493 aa	Known RBP	18.17	■□□□□ 0.5
SUN1-233	ENST00000488628	KIAA1549L	Q6ZVL6	1849 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628		K7ESF4	209 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	MAPK13	O15264	365 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	CCDC130	P13994	396 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	GJA4	P35212	333 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	PIK3CA	P42336	1068 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	GCLM	P48507	274 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	GALK1	P51570	392 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	NDST1	P52848	882 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	ADAM9	Q13443	819 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	PDGFRL	Q15198	375 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	EML3	Q32P44	896 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	TMEM196	Q5HYL7	178 aa		18.16	■□□□□ 0.5
SUN1-233	ENST00000488628	FAM35A	Q86V20	835 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms