RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 DGKKQ5KSL6 1271 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 PLAG1Q6DJT9 500 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 XRRA1Q6P2D8 792 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 KRT28Q7Z3Y7 464 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 MAVSQ7Z434 540 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 SUPT20HQ8NEM7 779 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 RFKQ969G6 155 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 PPP2R3CQ969Q6 453 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 GDF15Q99988 308 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 ALG13Q9NP73 1137 aaKnown RBP6.43□□□□□ -1.38
USP48-209ENST00000487880 SALL3Q9BXA9 1300 aa6.43□□□□□ -1.38
USP48-209ENST00000487880 AQP7P3A6NL99 342 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 SLC16A3O15427 465 aaKnown RBP6.42□□□□□ -1.38
USP48-209ENST00000487880 TLR5O60602 858 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 ERBB2P04626 1255 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 PCSK6P29122 969 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 ADORA2AP29274 412 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 PRKAG1P54619 331 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 SLC35G1Q2M3R5 365 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 CERCAMQ5T4B2 595 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 TEDDM1Q5T9Z0 273 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 BEND5Q7L4P6 421 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 ABRAQ8N0Z2 381 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 FANCBQ8NB91 859 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 SLC9A6Q92581 669 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 CAVIN3Q969G5 261 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 KIAA1191Q96A73 305 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 PDLIM2Q96JY6 352 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 PBKQ96KB5 322 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 CERS4Q9HA82 394 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
USP48-209ENST00000487880 GJB4Q9NTQ9 266 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 FOXJ2Q9P0K8 574 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 DKK3Q9UBP4 350 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 ING1Q9UK53 422 aaPredicted RBP6.42□□□□□ -1.38
USP48-209ENST00000487880 PACSIN3Q9UKS6 424 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 SNX14Q9Y5W7 946 aa6.42□□□□□ -1.38
USP48-209ENST00000487880 ZAR1LA6NP61 321 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 CD3EAPO15446 510 aaKnown RBP6.41□□□□□ -1.38
USP48-209ENST00000487880 KCNQ3O43525 872 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 SRGAP2O75044 1071 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 CHRM2P08172 466 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 HARSP12081 509 aaKnown RBP6.41□□□□□ -1.38
USP48-209ENST00000487880 MYL4P12829 197 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 TPH1P17752 444 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 PROZP22891 400 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 BCAT1P54687 386 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 MRPS35P82673 323 aaKnown RBP6.41□□□□□ -1.38
USP48-209ENST00000487880 BRD3Q15059 726 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 TBCCQ15814 346 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 ARL13BQ3SXY8 428 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 CACHD1Q5VU97 1274 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 SPARTQ8N0X7 666 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 DNAJB14Q8TBM8 379 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 ZNF384Q8TF68 577 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 TMEM171Q8WVE6 324 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 ATRIPQ8WXE1 791 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 TFAP2BQ92481 460 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 MPHOSPH6Q99547 160 aaKnown RBP6.41□□□□□ -1.38
USP48-209ENST00000487880 AS3MTQ9HBK9 375 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 TBC1D23Q9NUY8 699 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 SH2B3Q9UQQ2 575 aa6.41□□□□□ -1.38
USP48-209ENST00000487880 PIAS2O75928 621 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 RASAL1O95294 804 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 FSHBP01225 129 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 GCP02774 474 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 IL6RP08887 468 aaPredicted RBP6.4□□□□□ -1.38
USP48-209ENST00000487880 MAPK10P53779 464 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 INHBCP55103 352 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 TIAL1Q01085 375 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP48-209ENST00000487880 BTKQ06187 659 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 DPTQ07507 201 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 EIF2B5Q13144 721 aaKnown RBP6.4□□□□□ -1.38
USP48-209ENST00000487880 CCNIQ14094 377 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 MORC3Q14149 939 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 FHL2Q14192 279 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 ZNF169Q14929 603 aaPredicted RBP6.4□□□□□ -1.38
USP48-209ENST00000487880 DEPDC1Q5TB30 811 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 RRAGBQ5VZM2 374 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 KAZNQ674X7 775 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 MRGPRGQ86SM5 289 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 IZUMO1Q8IYV9 350 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 SPICE1Q8N0Z3 855 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 SLC16A11Q8NCK7 471 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 ACTRT2Q8TDY3 377 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 SOCS4Q8WXH5 440 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 GLG1Q92896 1179 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 HEYLQ9NQ87 328 aaPredicted RBP6.4□□□□□ -1.38
USP48-209ENST00000487880 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.38
USP48-209ENST00000487880 EHD3Q9NZN3 535 aa6.4□□□□□ -1.38
USP48-209ENST00000487880 A0A087X1B8 175 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 A1L4Q6 167 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 NXPH3O95157 252 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 SLPIP03973 132 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 GABRB3P28472 473 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 LIPAP38571 399 aa6.39□□□□□ -1.39
USP48-209ENST00000487880 HSPA7P48741 367 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms