RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 COASYQ13057 564 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 LRCH2Q5VUJ6 765 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 SLFN13Q68D06 897 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 TMEM200BQ69YZ2 307 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 TAPT1Q6NXT6 567 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 SLC4A10Q6U841 1118 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 GPR155Q7Z3F1 870 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 RBM23Q86U06 439 aaKnown RBP5.21□□□□□ -1.58
CNN3-206ENST00000487539 CCDC105Q8IYK2 499 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 MYOCDQ8IZQ8 938 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 EFHBQ8N7U6 833 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 MB21D1Q8N884 522 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 VN1R2Q8NFZ6 395 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 OR2W6PQ8NHA6 318 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 RUBCNQ92622 972 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 FOXRED1Q96CU9 486 aaPredicted RBP5.21□□□□□ -1.58
CNN3-206ENST00000487539 C16orf92Q96LL3 132 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 TARS2Q9BW92 718 aaKnown RBP5.21□□□□□ -1.58
CNN3-206ENST00000487539 APOL5Q9BWW9 433 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 OXSMQ9NWU1 459 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 RAI14Q9P0K7 980 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 HMG20BQ9P0W2 317 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 INSL6Q9Y581 213 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 HELZ2Q9BYK8 2649 aaKnown RBP5.21□□□□□ -1.58
CNN3-206ENST00000487539 SCN10AQ9Y5Y9 1956 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 FANCMQ8IYD8 2048 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 MUSKO15146 869 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 MAFGO15525 162 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 GPR42O15529 346 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 PRLP01236 227 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 LDHCP07864 332 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 SUPT20HL2P0C7V6 817 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 ZNF888P0CJ79 500 aaPredicted RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 SLC9A1P19634 815 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 MEOX1P50221 254 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 CLCN5P51795 746 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 DSG1Q02413 1049 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 SPTY2D1Q68D10 685 aaPredicted RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 SLFN12LQ6IEE8 588 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 SDE2Q6IQ49 451 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 GIMAP6Q6P9H5 292 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 ZGPATQ8N5A5 531 aaKnown RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 MSL3Q8N5Y2 521 aaKnown RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 FAM133AQ8N9E0 248 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 DNERQ8NFT8 737 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 SUSD6Q92537 303 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 ELF4Q99607 663 aaPredicted RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 TOMM22Q9NS69 142 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 MAPRE3Q9UPY8 281 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 PA2G4Q9UQ80 394 aaKnown RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 MYH1P12882 1939 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 CEP295Q9C0D2 2601 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 IL16Q14005 1332 aa5.2□□□□□ -1.58
CNN3-206ENST00000487539 MYO5AQ9Y4I1 1855 aaKnown RBP5.2□□□□□ -1.58
CNN3-206ENST00000487539 FOCADQ5VW36 1801 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 ABHD14A-ACY1A0A1B0GW23 586 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 PER2O15055 1255 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 NCK2O43639 380 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 CNOT4O95628 575 aaKnown RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 MYCLP1P12525 358 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 CTNNB1P35222 781 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 MCAMP43121 646 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 NRIP1P48552 1158 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 KPNA1P52294 538 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 RRADP55042 308 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 SESN2P58004 480 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 RAC3P60763 192 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 SLC6A3Q01959 620 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 SOWAHCQ53LP3 525 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 TRIM68Q6AZZ1 485 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 TIGD7Q6NT04 549 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 LRRC8DQ7L1W4 858 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 CIR1Q86X95 450 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 PHYKPLQ8IUZ5 450 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 FBXO16Q8IX29 292 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 TUBGCP5Q96RT8 1024 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 LMF1Q96S06 567 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 NUP88Q99567 741 aaPredicted RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 S1PR5Q9H228 398 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 MSL2Q9HCI7 577 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 THG1LQ9NWX6 298 aaKnown RBP5.19□□□□□ -1.58
CNN3-206ENST00000487539 CDC42EP3Q9UKI2 254 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 VWA7Q9Y334 891 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 TCAF1Q9Y4C2 921 aa5.19□□□□□ -1.58
CNN3-206ENST00000487539 ZNF891A8MT65 544 aaPredicted RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 GSG1L2A8MUP6 293 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 C2CD4DB7Z1M9 353 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 MPHOSPH10O00566 681 aaKnown RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 ZEB2O60315 1214 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 ALDH1L1O75891 902 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 MAP4K4O95819 1239 aaPredicted RBP5.18□□□□□ -1.58
CNN3-206ENST00000487539 HLA-DOAP06340 250 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 PROS1P07225 676 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 SP9P0CG40 484 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CYP2D6P10635 497 aa5.18□□□□□ -1.58
CNN3-206ENST00000487539 CKBP12277 381 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms