RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 OSMP13725 252 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 COPB2P35606 906 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 RGS2P41220 211 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 RCAN1P53805 252 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 SMAD4Q13485 552 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ODF1Q14990 250 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PPP2R5BQ15173 497 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PKN1Q16512 942 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ME3Q16798 604 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PRAMEF19Q5SWL8 479 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 NOL8Q76FK4 1167 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 FAM133AQ8N9E0 248 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 JPH3Q8WXH2 748 aaPredicted RBP7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 SOCS4Q8WXH5 440 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PHKBQ93100 1093 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ZBTB8AQ96BR9 441 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 RAX2Q96IS3 184 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 LZTS2Q9BRK4 669 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 MTG2Q9H4K7 406 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PRDM12Q9H4Q4 367 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 ACAD9Q9H845 621 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 RBM28Q9NW13 759 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 CYP39A1Q9NYL5 469 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 FBXO40Q9UH90 709 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 USP18Q9UMW8 372 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDHA1Q9Y5I3 950 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 GPR45Q9Y5Y3 372 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 NUMBLQ9Y6R0 609 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 DDX49Q9Y6V7 483 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 NAV2Q8IVL1 2488 aa7.04□□□□□ -1.28
RTFDC1-209ENST00000487211 A0A1W2PPC1 479 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 MAFGO15525 162 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 PFKFB2O60825 505 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 CTDNEP1O95476 244 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 SNAI1O95863 264 aaPredicted RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 IFNAR1P17181 557 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 CYP2C19P33261 490 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 LGALS4P56470 323 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 RPS6P62753 249 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 MRPS9P82933 396 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 CD83Q01151 205 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 NFATC3Q12968 1075 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 RTP5Q14D33 572 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 CPA6Q8N4T0 437 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 NECAB1Q8N987 351 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 TRPV1Q8NER1 839 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 JADE3Q92613 823 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 RRP36Q96EU6 259 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 ZNF333Q96JL9 665 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 TEKT5Q96M29 485 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 TAAR1Q96RJ0 339 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 RHOBTB2Q9BYZ6 727 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 KCND1Q9NSA2 647 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 COL20A1Q9P218 1284 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 TMPRSS11EQ9UL52 423 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 MRPL11Q9Y3B7 192 aaKnown RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 PMF1-BGLAPU3KQ54 211 aa7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
RTFDC1-209ENST00000487211 ABCB11O95342 1321 aa7.02□□□□□ -1.28
RTFDC1-209ENST00000487211 A0A0G2JMZ2 1700 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 PLXNB2O15031 1838 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 CCDC196A0A1B0GTZ2 297 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ETV2O00321 342 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 MEIS2O14770 477 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ADAMTS3O15072 1205 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 MTHFD2P13995 350 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 AGXTP21549 392 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 CALML3P27482 149 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 HOXA13P31271 388 aaPredicted RBP7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ADCY8P40145 1251 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 MTNR1BP49286 362 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 CDK17Q00537 523 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 GHRHRQ02643 423 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ST3GAL1Q11201 340 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 TRIM25Q14258 630 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ANKRD1Q15327 319 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 STILQ15468 1287 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 WDR72Q3MJ13 1102 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 TMEM240Q5SV17 173 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 MAP3K21Q5TCX8 1036 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 KANK2Q63ZY3 851 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 MAMDC4Q6UXC1 1216 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 SLC30A10Q6XR72 485 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 RNF207Q6ZRF8 634 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 KCNK18Q7Z418 384 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 TMEFF1Q8IYR6 380 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 AUTS2Q8WXX7 1259 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 SIGLEC10Q96LC7 697 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 SLC2A13Q96QE2 648 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 UPF2Q9HAU5 1272 aaKnown RBP7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 PNMA2Q9UL42 364 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 ANKRD6Q9Y2G4 727 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
RTFDC1-209ENST00000487211 NID2Q14112 1375 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms