RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ENPEPQ07075 957 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 PDGFRLQ15198 375 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 SV2AQ7L0J3 742 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 SYNPOQ8N3V7 929 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 SPEM1Q8N4L4 309 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 SLC22A12Q96S37 553 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 CYP2S1Q96SQ9 504 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 B3GNT5Q9BYG0 378 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 TRPC7Q9HCX4 862 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 HPS4Q9NQG7 708 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 TRPM5Q9NZQ8 1165 aa20.33■□□□□ 0.85
CLIP2-206ENST00000487091 OTOGLQ3ZCN5 2332 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 LILRB5O75023 590 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 CKMP06732 381 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 TDGF1P13385 188 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 HDCP19113 662 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 NR2F2P24468 414 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 RPL13P26373 211 aaKnown RBP20.32■□□□□ 0.84
CLIP2-206ENST00000487091 CXCL12P48061 93 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 VAMP7P51809 220 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 USP46P62068 366 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 AMPD2Q01433 879 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 GAS6Q14393 721 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 MTF1Q14872 753 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 PON2Q15165 354 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 ZNF77Q15935 545 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 WDR44Q5JSH3 913 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 C1orf220Q5T0J3 134 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 TSSK4Q6SA08 328 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 ARL14EPQ8N8R7 260 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-206ENST00000487091 SUMF1Q8NBK3 374 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 RIN3Q8TB24 985 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 TNIP3Q96KP6 325 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 EBF3Q9H4W6 596 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 MAPK8IP1Q9UQF2 711 aa20.32■□□□□ 0.84
CLIP2-206ENST00000487091 C2orf78A6NCI8 922 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 ASS1P00966 412 aaKnown RBP20.31■□□□□ 0.84
CLIP2-206ENST00000487091 USP4Q13107 963 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 CCINQ13939 588 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 TRIM68Q6AZZ1 485 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 INTS8Q75QN2 995 aaKnown RBP20.31■□□□□ 0.84
CLIP2-206ENST00000487091 FMR1NBQ8N0W7 255 aaPredicted RBP20.31■□□□□ 0.84
CLIP2-206ENST00000487091 ZNF518BQ9C0D4 1074 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 SDCBP2Q9H190 292 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 RBM12Q9NTZ6 932 aaKnown RBP20.31■□□□□ 0.84
CLIP2-206ENST00000487091 TMEM30AQ9NV96 361 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 ARHGAP26Q9UNA1 814 aa20.31■□□□□ 0.84
CLIP2-206ENST00000487091 ATP8B3O60423 1300 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 WDR87Q6ZQQ6 2873 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 ZNF840PA6NDX5 716 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 OTOL1A6NHN0 477 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-206ENST00000487091 CLDN5O00501 218 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 AKAP3O75969 853 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 CLSTN1O94985 981 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 PAPSS2O95340 614 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-206ENST00000487091 PSMC2P35998 433 aaKnown RBP20.3■□□□□ 0.84
CLIP2-206ENST00000487091 RAP1GAPP47736 663 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 CACNA2D1P54289 1103 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 ADAM9Q13443 819 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 SCARA5Q6ZMJ2 495 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 OSCP1Q8WVF1 389 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 RUBCNQ92622 972 aa20.3■□□□□ 0.84
CLIP2-206ENST00000487091 ZNF292O60281 2723 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 TRDMT1O14717 391 aaKnown RBP20.29■□□□□ 0.84
CLIP2-206ENST00000487091 HLA-DRAP01903 254 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 KRT13P13646 458 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 ARSAP15289 507 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 MCCD1P59942 119 aaPredicted RBP20.29■□□□□ 0.84
CLIP2-206ENST00000487091 TAF10Q12962 218 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 EDRF1Q3B7T1 1238 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 PAQR9Q6ZVX9 377 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 UNC93AQ86WB7 457 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 FAM186BQ8IYM0 893 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 NUP93Q8N1F7 819 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 CRYBG2Q8N1P7 616 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 KIAA1958Q8N8K9 716 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 SH3RF2Q8TEC5 729 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 ELMO3Q96BJ8 720 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 SLITRK1Q96PX8 696 aa20.29■□□□□ 0.84
CLIP2-206ENST00000487091 DUS2Q9NX74 493 aaKnown RBP20.29■□□□□ 0.84
CLIP2-206ENST00000487091 GPR179Q6PRD1 2367 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 HELZP42694 1942 aaKnown RBP20.28■□□□□ 0.84
CLIP2-206ENST00000487091 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
CLIP2-206ENST00000487091 YWHAQP27348 245 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 PIK3CAP42336 1068 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 IFNAR2P48551 515 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 SLC7A9P82251 487 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 SATB1Q01826 763 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 GRSF1Q12849 480 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLIP2-206ENST00000487091 TMEM196Q5HYL7 178 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 Q6ZS52 159 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 FAM35AQ86V20 835 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 CPA6Q8N4T0 437 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 OVCA2Q8WZ82 227 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 ATP2A3Q93084 1043 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 CHFRQ96EP1 664 aa20.28■□□□□ 0.84
CLIP2-206ENST00000487091 SMARCD1Q96GM5 515 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms