RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 GPIHBP1Q8IV16 184 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 PPM1KQ8N3J5 372 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 SLC44A3Q8N4M1 653 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 TTC39CQ8N584 583 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 FLCNQ8NFG4 579 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 SLC2A14Q8TDB8 520 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 SMARCD2Q92925 531 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 ASB16Q96NS5 453 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
NEK4-204ENST00000487068 EHD2Q9NZN4 543 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 GCNT4Q9P109 453 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 MYOFQ9NZM1 2061 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 H0Y858 1186 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 NRG2O14511 850 aaPredicted RBP10.84□□□□□ -0.67
NEK4-204ENST00000487068 CILPO75339 1184 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 CKMP06732 381 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 FAM200BP0CF97 657 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 VIPR2P41587 438 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 INCA1Q0VD86 236 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 CUL2Q13617 745 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 STX1AQ16623 288 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 SIX5Q8N196 739 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 MAB21L3Q8N8X9 362 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 C12orf29Q8N999 325 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 TATDN2Q93075 761 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 ZSWIM3Q96MP5 696 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 TWNKQ96RR1 684 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
NEK4-204ENST00000487068 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 ATG2BQ96BY7 2078 aa10.84□□□□□ -0.67
NEK4-204ENST00000487068 PROB1E7EW31 1015 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 MOSPD3O75425 235 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 ECI2O75521 394 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 NOL4O94818 638 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 CD19P15391 556 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 HMGA1P17096 107 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 ERCC5P28715 1186 aaPredicted RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 CACNA2D1P54289 1103 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 MARSP56192 900 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 MAP3K7CLP57077 242 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 TANGO2Q6ICL3 276 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 CAVIN1Q6NZI2 390 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 FBXO32Q969P5 355 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 CYFIP2Q96F07 1278 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 SPATA17Q96L03 361 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 C8orf48Q96LL4 319 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 HEXIM2Q96MH2 286 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 SLITRK1Q96PX8 696 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 TRMT61BQ9BVS5 477 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 INTS2Q9H0H0 1204 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 SMG9Q9H0W8 520 aaKnown RBP10.83□□□□□ -0.68
NEK4-204ENST00000487068 THAP9Q9H5L6 903 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 TASP1Q9H6P5 420 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 ANO10Q9NW15 660 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 COQ4Q9Y3A0 265 aa10.83□□□□□ -0.68
NEK4-204ENST00000487068 HEPACAM2A8MVW5 462 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 P4HA2O15460 535 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 GALR2O43603 387 aaPredicted RBP10.82□□□□□ -0.68
NEK4-204ENST00000487068 RTN3O95197 1032 aaPredicted RBP10.82□□□□□ -0.68
NEK4-204ENST00000487068 PRAMEF12O95522 483 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 PDGFBP01127 241 aaPredicted RBP10.82□□□□□ -0.68
NEK4-204ENST00000487068 TPM2P07951 284 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 PSMC3P17980 439 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 FCARP24071 287 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 DDX6P26196 483 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEK4-204ENST00000487068 YWHAQP27348 245 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 GDI1P31150 447 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 SLC5A3P53794 718 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 SLC8A3P57103 927 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 GPC5P78333 572 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 PFKPQ01813 784 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 TXNDC8Q6A555 127 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 TMEM270Q6UE05 265 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 VITQ6UXI7 678 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 FUKQ8N0W3 1084 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 NUP93Q8N1F7 819 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 DEPDC1BQ8WUY9 529 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 E2F7Q96AV8 911 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 TMEM176AQ96HP8 235 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 FAXDC2Q96IV6 333 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 CEP295NLQ96MC4 621 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 KCNK16Q96T55 309 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 CRACR2AQ9BSW2 395 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 NACA2Q9H009 215 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 SLC24A3Q9HC58 644 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 ARHGEF3Q9NR81 526 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 TMEM30AQ9NV96 361 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 ZMYM5Q9UJ78 669 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
NEK4-204ENST00000487068 PCDHB4Q9Y5E5 795 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms