RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 BTKQ06187 659 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 GMCL1P1Q8NEA9 526 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 TLR10Q9BXR5 811 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 LATS2Q9NRM7 1088 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 FBXO28Q9NVF7 368 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 LSM8O95777 96 aaKnown RBP17.05■□□□□ 0.32
COL7A1-210ENST00000487017 NOTUMQ6P988 496 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 SLC26A11Q86WA9 606 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 SLC7A5P2Q9GIP4 190 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 TAGLN3Q9UI15 199 aa17.05■□□□□ 0.32
COL7A1-210ENST00000487017 PTPN4P29074 926 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 TJAP1Q5JTD0 557 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ZSCAN5CA6NGD5 496 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-210ENST00000487017 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
COL7A1-210ENST00000487017 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 TNIP2Q8NFZ5 429 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 NAALADL1Q9UQQ1 740 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 CNTFP26441 200 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 AQP5P55064 265 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 IL1RAPL1Q9NZN1 696 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FAM32AQ9Y421 112 aaKnown RBP17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ATP6V1B1P15313 513 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 EPHB2P29323 1055 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 S100A5P33763 92 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 RGS4P49798 205 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ERVK-9P63128 1117 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 MEA1Q16626 185 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 ZCWPW2Q504Y3 356 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
COL7A1-210ENST00000487017 SGF29Q96ES7 293 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 CAAP1Q9H8G2 361 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 M0QYT0 321 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 TADA2AO75478 443 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 SERPIND1P05546 499 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FAM153BP0C7A2 387 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 SERPINB5P36952 375 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 SNX17Q15036 470 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FAM153CQ494X1 144 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 TMCO5AQ8N6Q1 288 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FAR2Q96K12 515 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FAM153AQ9UHL3 310 aa17.04■□□□□ 0.32
COL7A1-210ENST00000487017 FKBP9O95302 570 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 CTSHP09668 335 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 ORC1Q13415 861 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 SYTL3Q4VX76 610 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 TTC33Q6PID6 262 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-210ENST00000487017 FKBP9P1Q75LS8 142 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 TIMM44O43615 452 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 RASA2Q15283 850 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 EHD4Q9H223 541 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 UBQLN1Q9UMX0 589 aaKnown RBP17.03■□□□□ 0.32
COL7A1-210ENST00000487017 RHOBTB1O94844 696 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 CYP2C9P11712 490 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 TMEM119Q4V9L6 283 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 EFCAB1Q9HAE3 211 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 ZNF556Q9HAH1 456 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 DNAJC16Q9Y2G8 782 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 C5orf58C9J3I9 102 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 RPS6KA5O75582 802 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 GEMP55040 296 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 CCDC92Q53HC0 331 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-210ENST00000487017 ANGEL2Q5VTE6 544 aaKnown RBP17.03■□□□□ 0.32
COL7A1-210ENST00000487017 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 DDI1Q8WTU0 396 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 NAT9Q9BTE0 207 aa17.03■□□□□ 0.32
COL7A1-210ENST00000487017 PTRHD1Q6GMV3 140 aaKnown RBP17.02■□□□□ 0.32
COL7A1-210ENST00000487017 DCP1BQ8IZD4 617 aaKnown RBP17.02■□□□□ 0.32
COL7A1-210ENST00000487017 VPS50Q96JG6 964 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 RBBP8Q99708 897 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 USP18Q9UMW8 372 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 MAP2P11137 1827 aaKnown RBP17.02■□□□□ 0.32
COL7A1-210ENST00000487017 E7ENQ6 273 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 CYBBP04839 570 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 BGNP21810 368 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 PSMC6P62333 389 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 KIAA2013Q8IYS2 634 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 SAMD3Q8N6K7 520 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.32
COL7A1-210ENST00000487017 MUC3BQ9H195 1237 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 SCN3BQ9NY72 215 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 NDUFA13Q9P0J0 144 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 MAP3K6O95382 1288 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 ALBP02768 609 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 SUPT20HL2P0C7V6 817 aa17.02■□□□□ 0.32
COL7A1-210ENST00000487017 MAPTP10636 758 aaKnown RBP17.02■□□□□ 0.32
COL7A1-210ENST00000487017 PSMA4P25789 261 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms