RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
SNRNP40-205ENST00000486941 ATP11BQ9Y2G3 1177 aa4.95□□□□□ -1.62
SNRNP40-205ENST00000486941 RBBP6Q7Z6E9 1792 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-205ENST00000486941 FAM205AQ6ZU69 1335 aa4.95□□□□□ -1.62
SNRNP40-205ENST00000486941 SNAP23O00161 211 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 CDC45O75419 566 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 FOSP01100 380 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 HLA-DOAP06340 250 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 FGFR4P22455 802 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 GUCY1A2P33402 732 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 SLC6A9P48067 706 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 CXADRP78310 365 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 TNFAIP1Q13829 316 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 UBE4AQ14139 1066 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 SEPT2Q15019 361 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 ADRM1Q16186 407 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 CCDC57Q2TAC2 916 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 BEND3Q5T5X7 828 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 LDHAL6AQ6ZMR3 332 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 Q6ZNX1 250 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 PDZD4Q76G19 769 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 RNF180Q86T96 592 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 C11orf74Q86VG3 221 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 WDR63Q8IWG1 891 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 ANKRD13AQ8IZ07 590 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 TDRD7Q8NHU6 1098 aaKnown RBP4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 TGFBRAP1Q8WUH2 860 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 CLMNQ96JQ2 1002 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 DRC1Q96MC2 740 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 BCO1Q9HAY6 547 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 SEMA4GQ9NTN9 838 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 PLAAQ9Y263 795 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 TRIM17Q9Y577 477 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 PCDHAC2Q9Y5I4 1007 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 SSC5DA1L4H1 1573 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 FANCIQ9NVI1 1328 aa4.94□□□□□ -1.62
SNRNP40-205ENST00000486941 OTOFQ9HC10 1997 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 CLRN2A0PK11 232 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 GRM8O00222 908 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 ALDH1L1O75891 902 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 MYCLP1P12525 358 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 FDXRP22570 491 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 GCSHP23434 173 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 ALDH1A3P47895 512 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 RBM5P52756 815 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 HSD11B2P80365 405 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 SP3Q02447 781 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 SP140Q13342 867 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 UBXN2BQ14CS0 331 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 ARHGEF6Q15052 776 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 CYP2A13Q16696 494 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 CCDC184Q52MB2 194 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 TAF7LQ5H9L4 462 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 EPHA10Q5JZY3 1008 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 SP5Q6BEB4 398 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 Q8NA96 180 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 LMBR1Q8WVP7 490 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 UBXN4Q92575 508 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 FUBP3Q96I24 572 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 FAM84BQ96KN1 310 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 VEZTQ9HBM0 779 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 CNNM1Q9NRU3 951 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 C9orf78Q9NZ63 289 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 VSX1Q9NZR4 365 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 HSFX1Q9UBD0 423 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 ZNF70Q9UC06 446 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 TLK1Q9UKI8 766 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 AOX1Q06278 1338 aa4.93□□□□□ -1.62
SNRNP40-205ENST00000486941 TRIOBPQ9H2D6 2365 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 AK9Q5TCS8 1911 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 PLIN1O60240 522 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 PHF2O75151 1096 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 PCSK1P29120 753 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 ATXN1P54253 815 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 EXOSC9Q06265 439 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 DHCR24Q15392 516 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 MUM1Q2TAK8 710 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 UBR7Q8N806 425 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 OR2I1PQ8NGU4 316 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 CD99L2Q8TCZ2 262 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 ANKS1AQ92625 1134 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 OPTNQ96CV9 577 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 BOD1Q96IK1 185 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 QRSL1Q9H0R6 528 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 WDR26Q9H7D7 661 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 TDRD3Q9H7E2 651 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 RIPOR2Q9Y4F9 1068 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 ARAP2Q8WZ64 1704 aa4.92□□□□□ -1.62
SNRNP40-205ENST00000486941 CGB1A6NKQ9 187 aa4.91□□□□□ -1.62
SNRNP40-205ENST00000486941 WDHD1O75717 1129 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-205ENST00000486941 EN2P19622 333 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-205ENST00000486941 GYG1P46976 350 aa4.91□□□□□ -1.62
SNRNP40-205ENST00000486941 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-205ENST00000486941 NHLH1Q02575 133 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms