RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NT5DC4Q86YG4 428 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 RFX6Q8HWS3 928 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 TTC39CQ8N584 583 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 RSAD2Q8WXG1 361 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 CPT1BQ92523 772 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 ACAP3Q96P50 834 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 C16orf70Q9BSU1 422 aa18.85■□□□□ 0.61
PDLIM7-207ENST00000486828 FAM47DPA6NHR8 397 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 RDXP35241 583 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 ZNF143P52747 638 aaPredicted RBP18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 NDST1P52848 882 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 TAF5Q15542 800 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 NAT8LQ8N9F0 302 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 GPRC5AQ8NFJ5 357 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 UBA3Q8TBC4 463 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 HSPH1Q92598 858 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 TGS1Q96RS0 853 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 C10orf88Q9H8K7 445 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 DPP3Q9NY33 737 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 SLC24A2Q9UI40 661 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 KIAA1257Q9ULG3 409 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 SLC12A4Q9UP95 1085 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 POC1B-GALNT4F8VUJ3 575 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 GPD1P21695 349 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 ADORA2AP29274 412 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 RPL22P35268 128 aaKnown RBP18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 ARL4CP56559 192 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 CCNA1P78396 465 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 ADCY1Q08828 1119 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 LCLAT1Q6UWP7 414 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 SMC1BQ8NDV3 1235 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 MIS12Q9H081 205 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 RSAD1Q9HA92 442 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 SENP1Q9P0U3 644 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 PLXNA1Q9UIW2 1896 aa18.84■□□□□ 0.61
PDLIM7-207ENST00000486828 A0A1B0GUA9 196 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 GOLGA8MH3BSY2 632 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 PRPF4O43172 522 aaKnown RBP eCLIP18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 SUN1O94901 812 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 CYP3A5P20815 502 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 SLC18A1P54219 525 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 EIF3EP60228 445 aaKnown RBP18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 XRCC4Q13426 336 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 ANKRD22Q5VYY1 191 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 DPH6Q7L8W6 267 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 PEBP4Q96S96 227 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 CNPY3Q9BT09 278 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 CALN1Q9BXU9 219 aa18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 GBA2Q9HCG7 927 aaPredicted RBP18.83■□□□□ 0.6
PDLIM7-207ENST00000486828 C2CD4BA6NLJ0 364 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 SMAPO00193 183 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 MCF2LO15068 1137 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ENDOD1O94919 500 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ADCYAP1R1P41586 468 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 GPX6P59796 221 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 IL9RQ01113 521 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 PKN2Q16513 984 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 LDLRAD1Q5T700 205 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 CST9Q5W186 159 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 CAPN12Q6ZSI9 719 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 SPATA21Q7Z572 469 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ANKMY2Q8IV38 441 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 UNC45BQ8IWX7 931 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 KATNBL1Q9H079 304 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 TRABDQ9H4I3 376 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 KLC4Q9NSK0 619 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 HAUS2Q9NVX0 235 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.82■□□□□ 0.69e-8■■■■■ 27
PDLIM7-207ENST00000486828 FETUBQ9UGM5 382 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 TSPAN16Q9UKR8 245 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 PLXNB2O15031 1838 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 E7ESA3 106 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 H3BRB1 525 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 BANF1O75531 89 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 PHBP35232 272 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 GRM5P41594 1212 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 FKBP1BP68106 108 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 GAD2Q05329 585 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 STILQ15468 1287 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 FNBP1LQ5T0N5 605 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 OR6B2Q6IFH4 312 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 TRNP1Q6NT89 227 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 FAM183BPQ6ZVS7 135 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 CYP4V2Q6ZWL3 525 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ATP11CQ8NB49 1132 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 RXFP2Q8WXD0 754 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 KIF12Q96FN5 646 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 TUT1Q9H6E5 874 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ABCF3Q9NUQ8 709 aa18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 ZMYND8Q9ULU4 1186 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 SMG5Q9UPR3 1016 aaKnown RBP18.82■□□□□ 0.6
PDLIM7-207ENST00000486828 CLUHO75153 1309 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 E5RJQ4 531 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 PFKMP08237 780 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 PDGFRAP16234 1089 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms