RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ROPN1Q9HAT0 212 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 DDIT4Q9NX09 232 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 DCDC2CA8MYV0 355 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 GPR25O00155 361 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 VCPP55072 806 aaKnown RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 STRNO43815 780 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 BNIP3LO60238 219 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 AP1G2O75843 785 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 POMCP01189 267 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ZNF200P98182 395 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 MAP7D1Q3KQU3 841 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 BTBD8Q5XKL5 378 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 SLC2A14Q8TDB8 520 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 VCPIP1Q96JH7 1222 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 NINJ2Q9NZG7 142 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 O00370 1275 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 CPT1AP50416 773 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 DCAF4L1Q3SXM0 396 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 SV2CQ496J9 727 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 NUDCD3Q8IVD9 361 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 C3orf20Q8ND61 904 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 RAB3IPQ96QF0 476 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ASB7Q9H672 318 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 TNFSF13BQ9Y275 285 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 RGS20O76081 388 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 EIF4BP23588 611 aaKnown RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 TYK2P29597 1187 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 THOC5Q13769 683 aaKnown RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 DENND5BQ6ZUT9 1274 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 GTF3C2Q8WUA4 911 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-216ENST00000486741 EDEM1Q92611 657 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 EXT2Q93063 718 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 SERPINB12Q96P63 405 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 FIZ1Q96SL8 496 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 GOLGA2P5Q9HBQ8 144 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ZFYVE28Q9HCC9 887 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 ZFATQ9P243 1243 aa13.8□□□□□ -0.2
HMGN1-216ENST00000486741 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
HMGN1-216ENST00000486741 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 HIPK4Q8NE63 616 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.2
HMGN1-216ENST00000486741 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
HMGN1-216ENST00000486741 TTLL13PA6NNM8 815 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 FAM200BP0CF97 657 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PLPPR4Q7Z2D5 763 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
HMGN1-216ENST00000486741 TFAP2BQ92481 460 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PPP1R36Q96LQ0 422 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 KATNAL1Q9BW62 490 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PAK5Q9P286 719 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 EIF4E1BA6NMX2 242 aaKnown RBP13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PGK1P00558 417 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 EPHB2P29323 1055 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 CDC42EP1Q00587 391 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 MCL1Q07820 350 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
HMGN1-216ENST00000486741 PABPN1LA6NDY0 278 aaKnown RBP13.78□□□□□ -0.2
HMGN1-216ENST00000486741 BTBD19C9JJ37 291 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 UPP2O95045 317 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 CPB1P15086 417 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 C18orf25Q96B23 403 aaPredicted RBP13.78□□□□□ -0.2
HMGN1-216ENST00000486741 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 FSD1LQ9BXM9 530 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 ZFP69BQ9UJL9 534 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 CPSF3Q9UKF6 684 aaKnown RBP13.78□□□□□ -0.2
HMGN1-216ENST00000486741 AP4E1Q9UPM8 1137 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 TRIM49D1C9J1S8 452 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 VNN1O95497 513 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 GSTA1P08263 222 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 GSTA2P09210 222 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 OR1G1P47890 313 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 CORO7P57737 925 aa13.78□□□□□ -0.2
HMGN1-216ENST00000486741 ADIGQ0VDE8 80 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms