RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TAS1R1Q7RTX1 841 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 IRF2BP2Q7Z5L9 587 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 TMEM173Q86WV6 379 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 ERICH1Q86X53 443 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 SIX6OS1Q8N1H7 587 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 TMEM130Q8N3G9 435 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 ANKRD52Q8NB46 1076 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 ZNF461Q8TAF7 563 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 LNX1Q8TBB1 728 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 SLC2A14Q8TDB8 520 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 NKD2Q969F2 451 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 MYLPFQ96A32 169 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 B3GALT6Q96L58 329 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 SEPT5Q99719 369 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 HNRNPABQ99729 332 aaKnown RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 TRIM62Q9BVG3 475 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 ZCWPW1Q9H0M4 648 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 ZBP1Q9H171 429 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 LHX5Q9H2C1 402 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 DPEP3Q9H4B8 488 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 TLE6Q9H808 572 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 CERS4Q9HA82 394 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 ABCB6Q9NP58 842 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 DMAP1Q9NPF5 467 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 CHST7Q9NS84 486 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 MTRRQ9UBK8 725 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 AJAP1Q9UKB5 411 aaPredicted RBP7.35□□□□□ -1.23
UBR4-214ENST00000486515 TSPAN16Q9UKR8 245 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 STRIP2Q9ULQ0 834 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBR4-214ENST00000486515 VPS13AQ96RL7 3174 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
UBR4-214ENST00000486515 PDCD11Q14690 1871 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 GOLGA6L9A6NEM1 432 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 EIF3CLB5ME19 914 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 RNF225M0QZC1 329 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 KRT86O43790 486 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ATP2C2O75185 946 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 RTN2O75298 545 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 NDUFA10O95299 355 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 OR4Q2P0C623 313 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MYBL1P10243 752 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 GZMAP12544 262 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 CCDC130P13994 396 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ATF2P15336 505 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 NPR3P17342 541 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 BDNFP23560 247 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 DEKP35659 375 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 NBL1P41271 181 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MAGEA1P43355 309 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ZNF132P52740 706 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 EPHB3P54753 998 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MAP3K7CLP57077 242 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ADCY1Q08828 1119 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 RAB33AQ14088 237 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MRPL58Q14197 206 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 LEXMQ3ZCV2 418 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 CFAP221Q4G0U5 840 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ARHGAP29Q52LW3 1261 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 KIAA0319Q5VV43 1072 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 NAA35Q5VZE5 725 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 PTCRAQ6ISU1 281 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 SLC8B1Q6J4K2 584 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ACAD10Q6JQN1 1059 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ALKBH5Q6P6C2 394 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 ZNF571Q7Z3V5 609 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 LIMS2Q7Z4I7 341 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 NOP9Q86U38 636 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 ITIH5Q86UX2 942 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 FAM35AQ86V20 835 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 OSTM1Q86WC4 334 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 PALB2Q86YC2 1186 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 ZDHHC17Q8IUH5 632 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 PASD1Q8IV76 773 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 UBR7Q8N806 425 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MRPL43Q8N983 215 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 C12orf29Q8N999 325 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 UBA3Q8TBC4 463 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 SPPL3Q8TCT6 385 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 BCL7CQ8WUZ0 217 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 PCED1BQ96HM7 432 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 HSFY1Q96LI6 401 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 PGLYRP2Q96PD5 576 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 GCNAQ96QF7 691 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 EIF3CQ99613 913 aaKnown RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 CDCA3Q99618 268 aaPredicted RBP7.34□□□□□ -1.23
UBR4-214ENST00000486515 SELENOOQ9BVL4 669 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 DUSP16Q9BY84 665 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 GPR88Q9GZN0 384 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 FBXO44Q9H4M3 255 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 CYP4F11Q9HBI6 524 aa7.34□□□□□ -1.23
UBR4-214ENST00000486515 MRPL47Q9HD33 250 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms