RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 CNGA2Q16280 664 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 PUS10Q3MIT2 529 aaKnown RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 CYP4A22Q5TCH4 519 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 SFMBT2Q5VUG0 894 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 SDHAF4Q5VUM1 108 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 LCLAT1Q6UWP7 414 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 PDZD4Q76G19 769 aaPredicted RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 TMC6Q7Z403 805 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 GPR149Q86SP6 731 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 VSTM4Q8IW00 320 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 ANKRD52Q8NB46 1076 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 LEMD2Q8NC56 503 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 GPR152Q8TDT2 470 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 ZNF606Q8WXB4 792 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 MSLNLQ96KJ4 702 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 SPATA17Q96L03 361 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 NECTIN4Q96NY8 510 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 GCNAQ96QF7 691 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 CORO1BQ9BR76 489 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 GPR88Q9GZN0 384 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 UXTQ9UBK9 157 aaPredicted RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 MAGED2Q9UNF1 606 aaPredicted RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUP50-216ENST00000486184 LUC7L2Q9Y383 392 aaKnown RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 BRWD1Q9NSI6 2320 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 SLC38A8A6NNN8 435 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 MICAL2O94851 1124 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 FGF19O95750 216 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 CALCAP01258 141 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 MYL4P12829 197 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 CYP11B1P15538 503 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 CLCN1P35523 988 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 ZBED6P86452 979 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 ASIC2Q16515 512 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 LEXMQ3ZCV2 418 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 CLEC20AQ6ZU45 233 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 DENND5BQ6ZUT9 1274 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 PAQR9Q6ZVX9 377 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 GRASPQ7Z6J2 395 aaPredicted RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 SLC47A2Q86VL8 602 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 GPIHBP1Q8IV16 184 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 SMRP1Q8NCR6 262 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 PSMG2Q969U7 264 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 ZNF707Q96C28 371 aaPredicted RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 NOX5Q96PH1 765 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 KCNK16Q96T55 309 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 SMOQ99835 787 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 PNPLA8Q9NP80 782 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 ACP6Q9NPH0 428 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 SEPT11Q9NVA2 429 aaKnown RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 USP15Q9Y4E8 981 aaPredicted RBP12.04□□□□□ -0.48
NUP50-216ENST00000486184 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 DOCK6Q96HP0 2047 aa12.04□□□□□ -0.48
NUP50-216ENST00000486184 SZT2Q5T011 3432 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 GOLGA6L6A8MZA4 724 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 ZNF197O14709 1029 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 XPO1O14980 1071 aaKnown RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 AP5Z1O43299 807 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 CASP14P31944 242 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 SSTR3P32745 418 aaPredicted RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 CACNA2D1P54289 1103 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 PDE4CQ08493 712 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 CBX2Q14781 532 aaPredicted RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 MEA1Q16626 185 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 TAF3Q5VWG9 929 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 PTCRAQ6ISU1 281 aaPredicted RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 DNAJB7Q7Z6W7 309 aaPredicted RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 ZNF677Q86XU0 584 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 NUP93Q8N1F7 819 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 BAP1Q92560 729 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 SECISBP2LQ93073 1101 aaKnown RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 SLITRK1Q96PX8 696 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 S1PR5Q9H228 398 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 FBXO44Q9H4M3 255 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 LRRC4Q9HBW1 653 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 PRDM6Q9NQX0 595 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
NUP50-216ENST00000486184 HCFC1R1Q9NWW0 138 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 CAPN11Q9UMQ6 739 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 CLUHO75153 1309 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 ANAPC1Q9H1A4 1944 aa12.03□□□□□ -0.48
NUP50-216ENST00000486184 NUP210Q8TEM1 1887 aaPredicted RBP12.02□□□□□ -0.48
NUP50-216ENST00000486184 MBTPS2O43462 519 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 BEST1O76090 585 aa12.02□□□□□ -0.49
NUP50-216ENST00000486184 GYPCP04921 128 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms