RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 OTOL1A6NHN0 477 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-217ENST00000485985 EXOC3O60645 756 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 BDNFP23560 247 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 WDR72Q3MJ13 1102 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 MDH1BQ5I0G3 518 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 TDRD10Q5VZ19 366 aaKnown RBP22.28■■□□□ 1.16
LMBR1-217ENST00000485985 SPATA32Q96LK8 384 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 KCTD10Q9H3F6 313 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 DPEP3Q9H4B8 488 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 EBF3Q9H4W6 596 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 KIF9Q9HAQ2 790 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 TRPC7Q9HCX4 862 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 TMEM30AQ9NV96 361 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 MAGEC2Q9UBF1 373 aaPredicted RBP22.28■■□□□ 1.16
LMBR1-217ENST00000485985 CHD8Q9HCK8 2581 aa22.28■■□□□ 1.16
LMBR1-217ENST00000485985 SDK1Q7Z5N4 2213 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 LRRIQ3A6PVS8 624 aaPredicted RBP22.27■■□□□ 1.16
LMBR1-217ENST00000485985 SOBPA7XYQ1 873 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 TACC1O75410 805 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 STAU1O95793 577 aaKnown RBP22.27■■□□□ 1.16
LMBR1-217ENST00000485985 PRR29P0C7W0 189 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 USP46P62068 366 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 TNNC1P63316 161 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 KRT85P78386 507 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 CYP27A1Q02318 531 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 MAPRE1Q15691 268 aaKnown RBP22.27■■□□□ 1.16
LMBR1-217ENST00000485985 VSTM1Q6UX27 236 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 SNX25Q9H3E2 840 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 DMAC2Q9NW81 257 aa22.27■■□□□ 1.16
LMBR1-217ENST00000485985 C2orf78A6NCI8 922 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 ARSAP15289 507 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 CACNA2D1P54289 1103 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 USP4Q13107 963 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 ZNF268Q14587 947 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-217ENST00000485985 ZNF77Q15935 545 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 TMEM196Q5HYL7 178 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 PKN3Q6P5Z2 889 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 OR6B3Q8NGW1 331 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 GOLGA5Q8TBA6 731 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 MYCBPAPQ8TBZ2 947 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 PARD3BQ8TEW8 1205 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 ELMO3Q96BJ8 720 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 SPATA17Q96L03 361 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 CYP2S1Q96SQ9 504 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 SMYD3Q9H7B4 428 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 NXF1Q9UBU9 619 aaKnown RBP22.26■■□□□ 1.15
LMBR1-217ENST00000485985 MAP1BP46821 2468 aaKnown RBP22.26■■□□□ 1.15
LMBR1-217ENST00000485985 SPAG17Q6Q759 2223 aa22.26■■□□□ 1.15
LMBR1-217ENST00000485985 CNOT1A5YKK6 2376 aaKnown RBP22.25■■□□□ 1.15
LMBR1-217ENST00000485985 CCDC163A0A0D9SF12 145 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 GNL1P36915 607 aaPredicted RBP22.25■■□□□ 1.15
LMBR1-217ENST00000485985 NDUFA8P51970 172 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 CLDN10P78369 228 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 PSMD2Q13200 908 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 TRPC3Q13507 836 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 RUNX3Q13761 415 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 FSTL4Q6MZW2 842 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 GCNT4Q9P109 453 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 USP25Q9UHP3 1055 aa22.25■■□□□ 1.15
LMBR1-217ENST00000485985 MYOFQ9NZM1 2061 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 TRAV19A0A0A6YYK7 116 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 FAM237AA0A1B0GTK4 181 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 F8VP50 259 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 TRDMT1O14717 391 aaKnown RBP22.24■■□□□ 1.15
LMBR1-217ENST00000485985 AXIN1O15169 862 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 VNN1O95497 513 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 CKMP06732 381 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 GRIK1P39086 918 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 PXNP49023 591 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-217ENST00000485985 DLG4P78352 724 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 FAM160A1Q05DH4 1040 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 GRSF1Q12849 480 aaKnown RBP eCLIP22.24■■□□□ 1.15
LMBR1-217ENST00000485985 MTF1Q14872 753 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 SLC9A9Q8IVB4 645 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 ARL14EPQ8N8R7 260 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-217ENST00000485985 TMEM174Q8WUU8 243 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 GAB3Q8WWW8 586 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 SYAP1Q96A49 352 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-217ENST00000485985 LOXL4Q96JB6 756 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 ZNF518BQ9C0D4 1074 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 ARRDC1-AS1Q9H2J1 176 aa22.24■■□□□ 1.15
LMBR1-217ENST00000485985 ATG13O75143 517 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 RPP40O75818 363 aaKnown RBP22.23■■□□□ 1.15
LMBR1-217ENST00000485985 NR3C1P04150 777 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 RPN1P04843 607 aaKnown RBP22.23■■□□□ 1.15
LMBR1-217ENST00000485985 MYL1P05976 194 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 USP17L7P0C7H9 530 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 PTPN1P18031 435 aaKnown RBP22.23■■□□□ 1.15
LMBR1-217ENST00000485985 ATICP31939 592 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 SYKP43405 635 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 RAP1GAPP47736 663 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 BIRC3Q13489 604 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 ZNF699Q32M78 642 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 NAIF1Q69YI7 327 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-217ENST00000485985 DENND5BQ6ZUT9 1274 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 CACNA2D4Q7Z3S7 1137 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 B3GALNT2Q8NCR0 500 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 DDX1Q92499 740 aaKnown RBP22.23■■□□□ 1.15
LMBR1-217ENST00000485985 CEP295NLQ96MC4 621 aa22.23■■□□□ 1.15
LMBR1-217ENST00000485985 TTLL2Q9BWV7 592 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms