RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	SPPL3	Q8TCT6	385 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	ZCCHC4	Q9H5U6	513 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	CXorf36	Q9H7Y0	433 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	SCAF8	Q9UPN6	1271 aa	Known RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	SORCS3	Q9UPU3	1222 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	MTO1	Q9Y2Z2	717 aa	Known RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	MARCH11	A6NNE9	402 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567		F5H697	171 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	hCG_1984214	I3L0E3	225 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	RNASET2	O00584	256 aa	Known RBP	4.75	□□□□□ -1.65
FN1-222	ENST00000485567	RGS10	O43665	173 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	ASNA1	O43681	348 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	FAM155B	O75949	473 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	TNFRSF6B	O95407	300 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	MST1	P26927	711 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	MAPK9	P45984	424 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	NPTX2	P47972	431 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	PRKAG1	P54619	331 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	CXADR	P78310	365 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	MC2R	Q01718	297 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	CCNI	Q14094	377 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	EFR3A	Q14156	821 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	RRP1B	Q14684	758 aa	Known RBP	4.75	□□□□□ -1.65
FN1-222	ENST00000485567	CYP2A13	Q16696	494 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	PTCHD3	Q3KNS1	767 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	SPDYE7P	Q495Y7	208 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	RABL3	Q5HYI8	236 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	ICE2	Q659A1	982 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	LCNL1	Q6ZST4	164 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	RASGRP3	Q8IV61	690 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	SLC15A3	Q8IY34	581 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	ADGRG5	Q8IZF4	528 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
FN1-222	ENST00000485567	DNAJB14	Q8TBM8	379 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	SNX19	Q92543	992 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	SDCCAG3	Q96C92	435 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	UBXN10	Q96LJ8	280 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	NUDT22	Q9BRQ3	303 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	FAM167B	Q9BTA0	163 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	DDX23	Q9BUQ8	820 aa	Known RBP	4.75	□□□□□ -1.65
FN1-222	ENST00000485567	AMBRA1	Q9C0C7	1298 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	SLC25A32	Q9H2D1	315 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	PARD6A	Q9NPB6	346 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	TRPM5	Q9NZQ8	1165 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	KIF17	Q9P2E2	1029 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	PDP2	Q9P2J9	529 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	DNAJB11	Q9UBS4	358 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567	MRPS17	Q9Y2R5	130 aa	Known RBP	4.75	□□□□□ -1.65
FN1-222	ENST00000485567	HS3ST4	Q9Y661	456 aa		4.75	□□□□□ -1.65
FN1-222	ENST00000485567		A0A0B4J269	797 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567		A0A1B0GVC2	190 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	NCAM2	O15394	837 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SRGAP2	O75044	1071 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SCAF4	O95104	1147 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	VIP	P01282	170 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CSF1R	P07333	972 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	AR	P10275	920 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CST5	P28325	142 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CD6	P30203	668 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	PRKAR1B	P31321	381 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	PDE6C	P51160	858 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	BCAT1	P54687	386 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	ALDH18A1	P54886	795 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.74	□□□□□ -1.65	2e-19	■■■■■ 27.5
FN1-222	ENST00000485567	CRHR2	Q13324	411 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	TUBB3	Q13509	450 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CD300E	Q496F6	205 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	FBXO47	Q5MNV8	452 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	RBM20	Q5T481	1227 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CERCAM	Q5T4B2	595 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	ARHGAP40	Q5TG30	622 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	ABLIM2	Q6H8Q1	611 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SULT6B1	Q6IMI4	303 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	LIN54	Q6MZP7	749 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	KLHL17	Q6TDP4	642 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	MOGAT3	Q86VF5	341 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	TMPRSS6	Q8IU80	811 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SUGP1	Q8IWZ8	645 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	NRSN1	Q8IZ57	195 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	ABHD5	Q8WTS1	349 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	USP13	Q92995	863 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	FUBP1	Q96AE4	644 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	NACC2	Q96BF6	587 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	WWC2-AS2	Q96NR7	200 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	TEX101	Q9BY14	249 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	PABPC3	Q9H361	631 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	GBA2	Q9HCG7	927 aa	Predicted RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	GALNT9	Q9HCQ5	603 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	CD248	Q9HCU0	757 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SAYSD1	Q9NPB0	183 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	RRN3	Q9NYV6	651 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SRP68	Q9UHB9	627 aa	Known RBP	4.74	□□□□□ -1.65
FN1-222	ENST00000485567	VPS51	Q9UID3	782 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	SSX2IP	Q9Y2D8	614 aa		4.74	□□□□□ -1.65
FN1-222	ENST00000485567	NOX1	Q9Y5S8	564 aa		4.74	□□□□□ -1.65

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