RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ACE2Q9BYF1 805 aaPredicted RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 C22orf23Q9BZE7 217 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 LRRC27Q9C0I9 530 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 GLT8D2Q9H1C3 349 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 DUSP15Q9H1R2 295 aaPredicted RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 POFUT1Q9H488 388 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 EPHX3Q9H6B9 360 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 AKTIPQ9H8T0 292 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 VAT1LQ9HCJ6 419 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 KMT5AQ9NQR1 393 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 STARD7Q9NQZ5 370 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 PDRG1Q9NUG6 133 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 CYP39A1Q9NYL5 469 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 THEGQ9P2T0 379 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 ADD3Q9UEY8 706 aaKnown RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 SEC63Q9UGP8 760 aaKnown RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 EVLQ9UI08 416 aaPredicted RBP6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 TPCN1Q9ULQ1 816 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 LIMCH1Q9UPQ0 1083 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 PCDHGB2Q9Y5G2 931 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 PCDHA1Q9Y5I3 950 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 SPTBN4Q9H254 2564 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 EPG5Q9HCE0 2579 aa6.19□□□□□ -1.42
NHLRC3-205ENST00000485407 WDFY4Q6ZS81 3184 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 C22orf46C9J442 243 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 SNX2O60749 519 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PYGLP06737 847 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 SRFP11831 508 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 MYF5P13349 255 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PTMSP20962 102 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PDIA3P30101 505 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 STT3AP46977 705 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 FNTBP49356 437 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 LGALS4P56470 323 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 NHLH1Q02575 133 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 TOB2Q14106 344 aaPredicted RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PGBD2Q6P3X8 592 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 CPLX2Q6PUV4 134 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 RNF207Q6ZRF8 634 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 TSPYL5Q86VY4 417 aaPredicted RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 DRC7Q8IY82 874 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 SYTL1Q8IYJ3 562 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 SRBD1Q8N5C6 995 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 NAXEQ8NCW5 288 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 NSUN6Q8TEA1 469 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 CLEC4DQ8WXI8 215 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 TRIB2Q92519 343 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 MAML3Q96JK9 1138 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 TCEANC2Q96MN5 208 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PIGSQ96S52 555 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 MYL10Q9BUA6 226 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 RNF26Q9BY78 433 aaPredicted RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 ABHD16BQ9H3Z7 469 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 PAK6Q9NQU5 681 aaPredicted RBP6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 GULP1Q9UBP9 304 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 MCM3APO60318 1980 aa6.18□□□□□ -1.42
NHLRC3-205ENST00000485407 C5orf42Q9H799 3197 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 GCOM1H8Y6P7 765 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 KRIT1O00522 736 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 NFIBO00712 420 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CPLX1O14810 134 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 ADAMTS3O15072 1205 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 HTRA2O43464 458 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 PFKFB2O60825 505 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CDKL5O76039 1030 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 FTLP02792 175 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 FUCA1P04066 466 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 POLR2MP0CAP2 368 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 ZNF865P0CJ78 1059 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CPA1P15085 419 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 IFNAR1P17181 557 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 IL12RB1P42701 662 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 HSD17B4P51659 736 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 RPS6P62753 249 aaKnown RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CACNB2Q08289 660 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 TUSC3Q13454 348 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 BAATQ14032 418 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 PDE1CQ14123 709 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 STARD3Q14849 445 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 RABEP1Q15276 862 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 TOMM20Q15388 145 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 SLC35G1Q2M3R5 365 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 USH1GQ495M9 461 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 MUM1L1Q5H9M0 696 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CATSPEREQ5SY80 951 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 RNF111Q6ZNA4 994 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 PDZD4Q76G19 769 aaPredicted RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 LIX1LQ8IVB5 337 aa6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 SUGP1Q8IWZ8 645 aaKnown RBP6.17□□□□□ -1.42
NHLRC3-205ENST00000485407 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms