RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 ZNF268Q14587 947 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 CEP55Q53EZ4 464 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 MANEAQ5SRI9 462 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 EGFLAMQ63HQ2 1017 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 SDE2Q6IQ49 451 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ZNF280DQ6N043 979 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 MFSD6Q6ZSS7 791 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 C14orf80Q86SX3 495 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 KSR1Q8IVT5 923 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 PDCD6IPQ8WUM4 868 aaKnown RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 SREK1Q8WXA9 508 aaKnown RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 SNX19Q92543 992 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 SKA1Q96BD8 255 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 HDAC11Q96DB2 347 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 MRGPRX1Q96LB2 322 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 C5orf34Q96MH7 638 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 UROC1Q96N76 676 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ACAP3Q96P50 834 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ELF4Q99607 663 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 JPH2Q9BR39 696 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ZKSCAN3Q9BRR0 538 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 BCL11AQ9H165 835 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ABCG4Q9H172 646 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 RNF41Q9H4P4 317 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 RIOX1Q9H6W3 641 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 ZNF71Q9NQZ8 489 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 SAMM50Q9Y512 469 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 LRRK1Q38SD2 2015 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 EVPLQ92817 2033 aa4.07□□□□□ -1.76
CAPN8-210ENST00000484873 NUP210Q8TEM1 1887 aaPredicted RBP4.07□□□□□ -1.76
CAPN8-210ENST00000484873 MN1Q10571 1320 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PTGESO14684 152 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ZNF213O14771 459 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ANP32CO43423 234 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 LZTS3O60299 673 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 OPA1O60313 960 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TSPAN1O60635 241 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TNFSF15O95150 251 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 LIPCP11150 499 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 VAMP1P23763 118 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 NTSR1P30989 418 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PTGER4P35408 488 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TNFSF9P41273 254 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 CYP4F2P78329 520 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TAGLNQ01995 201 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 FAM160A1Q05DH4 1040 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 MRPL58Q14197 206 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 VEPH1Q14D04 833 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TARBP2Q15633 366 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TAF12Q16514 161 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ISXQ2M1V0 245 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 LACTB2Q53H82 288 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 SLC27A1Q6PCB7 646 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 KIAA1324Q6UXG2 1013 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 RNF19BQ6ZMZ0 732 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TEX19Q8NA77 164 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TTC16Q8NEE8 873 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 BEST2Q8NFU1 509 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 RIN3Q8TB24 985 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 IPO4Q8TEX9 1081 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 HTR3CQ8WXA8 447 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 DRC1Q96MC2 740 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ZSCAN10Q96SZ4 725 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 OXCT2Q9BYC2 517 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ACE2Q9BYF1 805 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 MINDY3Q9H8M7 445 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PSTPIP2Q9H939 334 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TM9SF3Q9HD45 589 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ZDHHC4Q9NPG8 344 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 CD93Q9NPY3 652 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PRDM8Q9NQV8 689 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ITM2CQ9NQX7 267 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ARHGEF4Q9NR80 690 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 TBC1D22BQ9NU19 505 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 USP36Q9P275 1121 aaKnown RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 MAD2L2Q9UI95 211 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ERRFI1Q9UJM3 462 aaPredicted RBP4.06□□□□□ -1.76
CAPN8-210ENST00000484873 ACSL6Q9UKU0 697 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PCDHA6Q9UN73 950 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PCDHGA7Q9Y5G6 932 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 PCDHA8Q9Y5H6 950 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 COL4A3BPQ9Y5P4 624 aa4.06□□□□□ -1.76
CAPN8-210ENST00000484873 CSMD2Q7Z408 3487 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 MYLKQ15746 1914 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 APCP25054 2843 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 FAM221AA4D161 298 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 TBC1D3BA6NDS4 549 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 PRR19A6NJB7 356 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 TTLL8A6PVC2 850 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 BTBD18B2RXH4 712 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 I3L4J1 428 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 MEIS1O00470 390 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 VILLO15195 856 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 IPO8O15397 1037 aaKnown RBP4.05□□□□□ -1.76
CAPN8-210ENST00000484873 FOXP2O15409 715 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 DHX15O43143 795 aaKnown RBP4.05□□□□□ -1.76
CAPN8-210ENST00000484873 SMARCA5O60264 1052 aaPredicted RBP4.05□□□□□ -1.76
CAPN8-210ENST00000484873 NOBOXO60393 691 aa4.05□□□□□ -1.76
CAPN8-210ENST00000484873 GP1BAP07359 652 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms