RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 SIPA1Q96FS4 1042 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 ADAD1Q96M93 576 aaKnown RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 FAM111AQ96PZ2 611 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 HEPHQ9BQS7 1158 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 TEX12Q9BXU0 123 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 EIF2AQ9BY44 585 aaKnown RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 GPR63Q9BZJ6 419 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 ABCG8Q9H221 673 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 CHRDQ9H2X0 955 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 HAUS4Q9H6D7 363 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 MRPL44Q9H9J2 332 aaKnown RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 LIN7BQ9HAP6 207 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 IL1RAPL2Q9NP60 686 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 ZFP64Q9NPA5 681 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 NRIP3Q9NQ35 241 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 FAM114A2Q9NRY5 505 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 TM7SF3Q9NS93 570 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 FKBP14Q9NWM8 211 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 TAB2Q9NYJ8 693 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 WHRNQ9P202 907 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 MBD1Q9UIS9 605 aaPredicted RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 FEM1BQ9UK73 627 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 TLK1Q9UKI8 766 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 SLC39A10Q9ULF5 831 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 NAALADL1Q9UQQ1 740 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 POLR3KQ9Y2Y1 108 aaPredicted RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
FXN-204ENST00000484259 NPFFR2Q9Y5X5 522 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 LYVE1Q9Y5Y7 322 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 FAM169AQ9Y6X4 670 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 KIF27Q86VH2 1401 aa3.69□□□□□ -1.82
FXN-204ENST00000484259 SYNJ1O43426 1573 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TRAV6A0A075B6T7 132 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 MAGEB16A2A368 324 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 XKRY2A2RUG3 117 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TRIM43BA6NCK2 446 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TTC34A8MYJ7 566 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 FAM86B1E9PN63 330 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 NFKBIEO00221 500 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 E2F3O00716 465 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TNFRSF10CO14798 259 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 IFIT3O14879 490 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 KIAA0355O15063 1070 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TO15178 435 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 NVLO15381 856 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 ARHGAP6O43182 974 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CA12O43570 354 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CACNG3O60359 315 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CIDEAO60543 219 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ZC3H11AO75152 810 aaKnown RBP eCLIP3.68□□□□□ -1.82
FXN-204ENST00000484259 NIPSNAP2O75323 286 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 GJB3O75712 270 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CRTAPO75718 401 aaPredicted RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 IPO13O94829 963 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 GCNT3O95395 438 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 METTL18O95568 372 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 STAU1O95793 577 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 ALDH2P05091 517 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CKMP06732 381 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ACRP10323 421 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 PRKAR1AP10644 381 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 C6P13671 934 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CCDC130P13994 396 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ATP2A2P16615 1042 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 CTSSP25774 331 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 BMI1P35226 326 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 MAP2K2P36507 400 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TXLNAP40222 546 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 PSMB10P40306 273 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CASP3P42574 277 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TXKP42681 527 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CTSOP43234 321 aaPredicted RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 GCLCP48506 637 aaPredicted RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 LMAN1P49257 510 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 DHPSP49366 369 aaPredicted RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 PSMD7P51665 324 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CCR5P51681 352 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 MNAT1P51948 309 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ATXN3P54252 364 aaPredicted RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 HERVK_113P62684 666 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ERVK-24P63145 666 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 RNASELQ05823 741 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
FXN-204ENST00000484259 MAP3K12Q12852 859 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 LMAN2Q12907 356 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CUL1Q13616 776 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 SLC12A1Q13621 1099 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 LRRC14Q15048 493 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 AGERQ15109 404 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 POU4F3Q15319 338 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 BAK1Q16611 211 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 ZNF827Q17R98 1081 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 TBC1D25Q3MII6 688 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 CYP27C1Q4G0S4 372 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 OLFML2BQ68BL8 750 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 KRT80Q6KB66 452 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 MIS18BP1Q6P0N0 1132 aa3.68□□□□□ -1.82
FXN-204ENST00000484259 MTFR2Q6P444 385 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms