RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 B4GALT3O60512 393 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 CYP1A2P05177 515 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 FAM200BP0CF97 657 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 DESP17661 470 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 GPD2P43304 727 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 HADHBP55084 474 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 GNG11P61952 73 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 ORC1Q13415 861 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 MRPL58Q14197 206 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 ZNF268Q14587 947 aaPredicted RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 COL19A1Q14993 1142 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 CTXN3Q4LDR2 81 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 TCEAL5Q5H9L2 206 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 MDH1BQ5I0G3 518 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 VARS2Q5ST30 1063 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 DENND1BQ6P3S1 775 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 SLC39A11Q8N1S5 342 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 C17orf53Q8N3J3 647 aaPredicted RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 COLGALT1Q8NBJ5 622 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 C1orf131Q8NDD1 294 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 SLC2A14Q8TDB8 520 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 SMARCD1Q96GM5 515 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 FUBP3Q96I24 572 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 ZSWIM1Q9BR11 485 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 PLVAPQ9BX97 442 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 DUSP16Q9BY84 665 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 LACRTQ9GZZ8 138 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 DPEP3Q9H4B8 488 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 NSUN3Q9H649 340 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 FAM49BQ9NUQ9 324 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 TAS2R14Q9NYV8 317 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 CTTNBP2NLQ9P2B4 639 aa14.75□□□□□ -0.05
SMAD9-204ENST00000483941 CNOT8Q9UFF9 292 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 MRPL42Q9Y6G3 142 aaKnown RBP14.75□□□□□ -0.05
SMAD9-204ENST00000483941 MYO7AQ13402 2215 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 TECTAO75443 2155 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 MYO15AQ9UKN7 3530 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 MACROD2A1Z1Q3 448 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 XPO1O14980 1071 aaKnown RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 MTA2O94776 668 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 SOD2P04179 222 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 TNNT1P13805 278 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 NPR3P17342 541 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 ACAT1P24752 427 aaKnown RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 TKTP29401 623 aaKnown RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 GSCP56915 257 aaPredicted RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 PDCLQ13371 301 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 MON1BQ7L1V2 547 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 DDX53Q86TM3 631 aaKnown RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 SPATA2LQ8IUW3 424 aaPredicted RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 KIF18AQ8NI77 898 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 SLC35G2Q8TBE7 412 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 CLP1Q92989 425 aaKnown RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 GPR62Q9BZJ7 368 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMAD9-204ENST00000483941 CLDND1Q9NY35 253 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 BACE2Q9Y5Z0 518 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 KMT2EQ8IZD2 1858 aa14.74□□□□□ -0.05
SMAD9-204ENST00000483941 RCCD1A6NED2 376 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 H3BNC9 293 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
SMAD9-204ENST00000483941 CALCAP01258 141 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 ADORA2BP29275 332 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 CASQ1P31415 396 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 IRS1P35568 1242 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PLA2G4AP47712 749 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 GABRB2P47870 512 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PSMC1P62191 440 aaKnown RBP14.73□□□□□ -0.05
SMAD9-204ENST00000483941 GPM6BQ13491 265 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PKDCCQ504Y2 493 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 ZNF569Q5MCW4 686 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 VSTM1Q6UX27 236 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 MMS22LQ6ZRQ5 1243 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 TMEM110Q86TL2 294 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 FUKQ8N0W3 1084 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 UBA3Q8TBC4 463 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 SLC35F5Q8WV83 523 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PIK3R5Q8WYR1 880 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 KCTD13Q8WZ19 329 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PCED1BQ96HM7 432 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 HERC2P3Q9BVR0 1158 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PACSIN1Q9BY11 444 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 ABCB6Q9NP58 842 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PNPLA8Q9NP80 782 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 CRTAC1Q9NQ79 661 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 ST7Q9NRC1 585 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 CHST7Q9NS84 486 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 MAFFQ9ULX9 164 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 JRKLQ9Y4A0 524 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 PCDHB5Q9Y5E4 795 aa14.73□□□□□ -0.05
SMAD9-204ENST00000483941 FNDC1Q4ZHG4 1894 aaPredicted RBP14.72□□□□□ -0.05
SMAD9-204ENST00000483941 MYBPHLA2RUH7 354 aa14.72□□□□□ -0.05
SMAD9-204ENST00000483941 NT5C1B-RDH14C9J2C7 533 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms