RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TRAF3IP3Q9Y228 551 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 NME7Q9Y5B8 376 aa21.16■□□□□ 0.98
HPS4-213ENST00000483631 LRRIQ3A6PVS8 624 aaPredicted RBP21.15■□□□□ 0.98
HPS4-213ENST00000483631 A8MXQ7 604 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 IKBKBO14920 756 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 RHOBTB3O94955 611 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 NR3C1P04150 777 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 SATB1Q01826 763 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 ENPEPQ07075 957 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 BIRC3Q13489 604 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 NCOA4Q13772 614 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 KCNB1Q14721 858 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 ZNF699Q32M78 642 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 ZNF667Q5HYK9 610 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 B3GALNT2Q8NCR0 500 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 TTC8Q8TAM2 541 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 TAF4BQ92750 862 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 EBF3Q9H4W6 596 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 TRPC7Q9HCX4 862 aa21.15■□□□□ 0.98
HPS4-213ENST00000483631 RBM12Q9NTZ6 932 aaKnown RBP21.15■□□□□ 0.98
HPS4-213ENST00000483631 NXF1Q9UBU9 619 aaKnown RBP21.15■□□□□ 0.98
HPS4-213ENST00000483631 CALUO43852 315 aaPredicted RBP21.14■□□□□ 0.97
HPS4-213ENST00000483631 P4HA1P13674 534 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 HDCP19113 662 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 ID4P47928 161 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 CASP4P49662 377 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 GRSF1Q12849 480 aaKnown RBP eCLIP21.14■□□□□ 0.97
HPS4-213ENST00000483631 ZACNQ401N2 412 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 ERMP1Q7Z2K6 904 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 CPA6Q8N4T0 437 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 RIN3Q8TB24 985 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 ATP2A3Q93084 1043 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 TNIP3Q96KP6 325 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 SLC22A12Q96S37 553 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 NCDNQ9UBB6 729 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 FRMD4BQ9Y2L6 1034 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 CACNA1AO00555 2505 aa21.14■□□□□ 0.97
HPS4-213ENST00000483631 ATP8B3O60423 1300 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 F8VP50 259 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 K7ESF4 209 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 ATG13O75143 517 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 DRD1P21728 446 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 NDUFA8P51970 172 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 SGSM1Q2NKQ1 1148 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 FBXO43Q4G163 708 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 TRIM68Q6AZZ1 485 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 Q6ZS52 159 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 LONP2Q86WA8 852 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 ARL14EPQ8N8R7 260 aaPredicted RBP21.13■□□□□ 0.97
HPS4-213ENST00000483631 OVCA2Q8WZ82 227 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 CHFRQ96EP1 664 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 CCDC34Q96HJ3 373 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 CYP2S1Q96SQ9 504 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 ECT2Q9H8V3 914 aa21.13■□□□□ 0.97
HPS4-213ENST00000483631 DUS2Q9NX74 493 aaKnown RBP21.13■□□□□ 0.97
HPS4-213ENST00000483631 C2orf78A6NCI8 922 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 ZNF840PA6NDX5 716 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 OTOL1A6NHN0 477 aaPredicted RBP21.12■□□□□ 0.97
HPS4-213ENST00000483631 RTN3O95197 1032 aaPredicted RBP21.12■□□□□ 0.97
HPS4-213ENST00000483631 OLFM2O95897 454 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 IFNAR2P48551 515 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 USP46P62068 366 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 SLC7A9P82251 487 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 DPYDQ12882 1025 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 KRBA2Q6ZNG9 492 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 SLITRK1Q96PX8 696 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 DPEP3Q9H4B8 488 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 RAB23Q9ULC3 237 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 GTF3C3Q9Y5Q9 886 aa21.12■□□□□ 0.97
HPS4-213ENST00000483631 ATG2BQ96BY7 2078 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 SPAG17Q6Q759 2223 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 MYH10P35580 1976 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 CCDC163A0A0D9SF12 145 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 CHURC1-FNTBB4DL54 471 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 VNN1O95497 513 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 ARSAP15289 507 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 GJA4P35212 333 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 NR1H3Q13133 447 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 EML3Q32P44 896 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 LAIR1Q6GTX8 287 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 FSTL4Q6MZW2 842 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 KIAA2013Q8IYS2 634 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 NUP93Q8N1F7 819 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 GUF1Q8N442 669 aaKnown RBP21.11■□□□□ 0.97
HPS4-213ENST00000483631 PDZD8Q8NEN9 1154 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 SH3RF2Q8TEC5 729 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 B3GNT5Q9BYG0 378 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 ZNF518BQ9C0D4 1074 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 SMYD3Q9H7B4 428 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 COMMD8Q9NX08 183 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 GMEB2Q9UKD1 530 aa21.11■□□□□ 0.97
HPS4-213ENST00000483631 ASS1P00966 412 aaKnown RBP21.1■□□□□ 0.97
HPS4-213ENST00000483631 MCCD1P59942 119 aaPredicted RBP21.1■□□□□ 0.97
HPS4-213ENST00000483631 INTS8Q75QN2 995 aaKnown RBP21.1■□□□□ 0.97
HPS4-213ENST00000483631 SV2AQ7L0J3 742 aa21.1■□□□□ 0.97
HPS4-213ENST00000483631 UNC93AQ86WB7 457 aa21.1■□□□□ 0.97
HPS4-213ENST00000483631 DCLK2Q8N568 766 aa21.1■□□□□ 0.97
HPS4-213ENST00000483631 CCDC26Q8TAB7 109 aa21.1■□□□□ 0.97
HPS4-213ENST00000483631 P2RY13Q9BPV8 354 aa21.1■□□□□ 0.97
HPS4-213ENST00000483631 TMEM30AQ9NV96 361 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms