RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 THSD7BQ9C0I4 1608 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 GOLGA6CA6NDK9 693 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 HCRTO43612 131 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 TRUB2O95900 331 aaKnown RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 GOLGA6DP0CG33 693 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 KDELR1P24390 212 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 HOXD10P28358 340 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 THPOP40225 353 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 RGS7P49802 495 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 SLC6A3Q01959 620 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 DSC3Q14574 896 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 TRIM71Q2Q1W2 868 aaKnown RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 FAM26DQ5JW98 314 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 ZFYVE27Q5T4F4 411 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 RHBDF2Q6PJF5 856 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 ARCQ7LC44 396 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 RXFP2Q8WXD0 754 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 SNF8Q96H20 258 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 TNIP3Q96KP6 325 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 GOLGA6AQ9NYA3 693 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 USP18Q9UMW8 372 aa13.91□□□□□ -0.18
CPNE1-225ENST00000483495 DRG1Q9Y295 367 aaKnown RBP13.91□□□□□ -0.18
CPNE1-225ENST00000483495 GABRDO14764 452 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PAPSS1O43252 624 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 THP07101 528 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PDGFRAP16234 1089 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 MLH1P40692 756 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 RAB27AP51159 221 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 CAV1Q03135 178 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 CALCOCO2Q13137 446 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 KAZNQ674X7 775 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 AGMOQ6ZNB7 445 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 OSTM1Q86WC4 334 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 CCDC89Q8N998 374 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 UBLCP1Q8WVY7 318 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 NKD2Q969F2 451 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 ACSF2Q96CM8 615 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 CCDC114Q96M63 670 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 GAD1Q99259 594 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 LPIN3Q9BQK8 851 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 FRMD8P1Q9BZ68 369 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 EPB41L4BQ9H329 900 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PABPC3Q9H361 631 aaKnown RBP13.9□□□□□ -0.18
CPNE1-225ENST00000483495 ZWILCHQ9H900 591 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PADI3Q9ULW8 664 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
CPNE1-225ENST00000483495 PIK3R2O00459 728 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CYB561D2O14569 222 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ENDOD1O94919 500 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 NUDT17P0C025 328 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CCDC130P13994 396 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 KLRC2P26717 231 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 PMS2P54278 862 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 DMTNQ08495 405 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SLMAPQ14BN4 828 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 OASLQ15646 514 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SMTNL2Q2TAL5 461 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CCDC14Q49A88 953 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 RNF180Q86T96 592 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 B3GALNT2Q8NCR0 500 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 FAM76AQ8TAV0 307 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 PXYLP1Q8TE99 480 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 HSFY1Q96LI6 401 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 HNRNPABQ99729 332 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 OSBPL7Q9BZF2 842 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 DNPEPQ9ULA0 475 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 MGEA5O60502 916 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CAND2O75155 1236 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 RARGP13631 454 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CD52P31358 61 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ACADSBP45954 432 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ARSEP51690 589 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ACLYP53396 1101 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 VCPP55072 806 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 EIF3BP55884 814 aaKnown RBP13.89□□□□□ -0.19
CPNE1-225ENST00000483495 LPIN1Q14693 890 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 KCNT1Q5JUK3 1230 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SLC26A9Q7LBE3 791 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SCUBE3Q8IX30 993 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 BBOF1Q8ND07 529 aa13.89□□□□□ -0.19
CPNE1-225ENST00000483495 SLC35B2Q8TB61 432 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms