RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SERPINA13PQ6UXR4 307 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 ABRAQ8N0Z2 381 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 GALNT4Q8N4A0 578 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 SLC15A4Q8N697 577 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 OSCP1Q8WVF1 389 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 MTFMTQ96DP5 389 aaKnown RBP3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 SNX18Q96RF0 628 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 MESP1Q9BRJ9 268 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 AASDHPPTQ9NRN7 309 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 FER1L4A9Z1Z3 1794 aa3.91□□□□□ -1.78
LAPTM4A-202ENST00000483117 MYO1CO00159 1063 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRIM38O00635 465 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 DLDP09622 509 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 VCAM1P19320 739 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 NEK2P51955 445 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 RAB1AP62820 205 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 KRT17Q04695 432 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 FGL2Q14314 439 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 LRRC41Q15345 812 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRIP6Q15654 476 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZNF260Q3ZCT1 412 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 CERKLQ49MI3 558 aaPredicted RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 IFIT1BQ5T764 474 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 PXDC1Q5TGL8 231 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 CAND1Q86VP6 1230 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 IZUMO1Q8IYV9 350 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 DNAJC5GQ8N7S2 189 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 TMEM171Q8WVE6 324 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 HOOK2Q96ED9 719 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 C1GALT1C1Q96EU7 318 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 ZC3H10Q96K80 434 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 PRR25Q96S07 402 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 TCF7L1Q9HCS4 588 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 CNNM1Q9NRU3 951 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRNAU1APQ9NX07 287 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 SCAF8Q9UPN6 1271 aaKnown RBP3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 SNX14Q9Y5W7 946 aa3.9□□□□□ -1.79
LAPTM4A-202ENST00000483117 A0A087WWL8 130 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 TCRBV5S1A1TA0A578 114 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 E5RJQ4 531 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 FCHO1O14526 889 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 OFD1O75665 1012 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 USP1O94782 785 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 THP07101 528 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 KCNA3P22001 575 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 IL1R2P27930 398 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 DGKEP52429 567 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 WNT3P56703 355 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 PSG6Q00889 435 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 SATB1Q01826 763 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 MGAT5BQ3V5L5 792 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 PRSS3P2Q8NHM4 247 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 DIS3LQ8TF46 1054 aaKnown RBP3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 RAPGEF4Q8WZA2 1011 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 NT5C1BQ96P26 610 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 NUP88Q99567 741 aaPredicted RBP3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 WACQ9BTA9 647 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 SLC12A5Q9H2X9 1139 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 PIH1D1Q9NWS0 290 aaKnown RBP3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 ANKRD6Q9Y2G4 727 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 AFG3L2Q9Y4W6 797 aa3.89□□□□□ -1.79
LAPTM4A-202ENST00000483117 A0A088AWK7 358 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 TMEM233B4DJY2 109 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 UBE2Q2LH0YL09 131 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 ADAM10O14672 748 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 AP1G1O43747 822 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 PRKCBP05771 671 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 CHRM5P08912 532 aaPredicted RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 CYP2C9P11712 490 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 NPR1P16066 1061 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 ATP5F1P24539 256 aaPredicted RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 PRKAG1P54619 331 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 CTBP1Q13363 440 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 MTHFD1LQ6UB35 978 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 COL23A1Q86Y22 540 aaPredicted RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 NANOGP1Q8N7R0 232 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 BPIFB1Q8TDL5 484 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 PPP2R3CQ969Q6 453 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 HMCESQ96FZ2 354 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 MMS19Q96T76 1030 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 FAM118BQ9BPY3 351 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 C17orf80Q9BSJ5 609 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 EFHD1Q9BUP0 239 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRIM54Q9BYV2 358 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 MS4A7Q9GZW8 240 aaPredicted RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 GBA2Q9HCG7 927 aaPredicted RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 LPAR3Q9UBY5 353 aa3.88□□□□□ -1.79
LAPTM4A-202ENST00000483117 ANKRD62A6NC57 917 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 PPM1GO15355 546 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 ABLIM3O94929 683 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 CT47B1P0C2W7 299 aaPredicted RBP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 KITP10721 976 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 XRCC6P12956 609 aaKnown RBP eCLIP3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 HTR1BP28222 390 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 PLCD1P51178 756 aa3.87□□□□□ -1.79
LAPTM4A-202ENST00000483117 ARFIP2P53365 341 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms