RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CDH23Q9H251 3354 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 TANC1Q9C0D5 1861 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 TTC36A6NLP5 189 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 KPNA6O60684 536 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 ZNF623O75123 536 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 CNOT4O95628 575 aaKnown RBP7.35□□□□□ -1.23
CLK1-212ENST00000482590 AKR1A1P14550 325 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 RHCEP18577 417 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 GRK6P43250 576 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 SUMO1P63165 101 aaKnown RBP7.35□□□□□ -1.23
CLK1-212ENST00000482590 ZBED6P86452 979 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 RHDQ02161 417 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 TMEM132BQ14DG7 1078 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 KIAA1755Q5JYT7 1200 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 INTS11Q5TA45 600 aaKnown RBP7.35□□□□□ -1.23
CLK1-212ENST00000482590 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
CLK1-212ENST00000482590 SLC39A5Q6ZMH5 540 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 SLC41A1Q8IVJ1 513 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 CHCHD4Q8N4Q1 142 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 NUDT10Q8NFP7 164 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 OR2W6PQ8NHA6 318 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 PHOSPHO1Q8TCT1 267 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 FERMT2Q96AC1 680 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 NUDT11Q96G61 164 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 SLF1Q9BQI6 1058 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 XPNPEP3Q9NQH7 507 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 MTMR10Q9NXD2 777 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 ADAM29Q9UKF5 820 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 CNPY2Q9Y2B0 182 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 TCAF1Q9Y4C2 921 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 NPFFR2Q9Y5X5 522 aa7.35□□□□□ -1.23
CLK1-212ENST00000482590 VWA5AO00534 786 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 CAPNS1P04632 268 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 CHGBP05060 677 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 PGK2P07205 417 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 ADCYAP1R1P41586 468 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 MAPK9P45984 424 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 TDO2P48775 406 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 KRT85P78386 507 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 APBA1Q02410 837 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 HSP90AA2PQ14568 343 aaPredicted RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 SPDYAQ5MJ70 313 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 PRAMEF19Q5SWL8 479 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 PHF19Q5T6S3 580 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 SNRNP48Q6IEG0 339 aaKnown RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 CTR9Q6PD62 1173 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 CMTR2Q8IYT2 770 aaKnown RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 SLC7A14Q8TBB6 771 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 Q8TCH9 128 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 CCT6BQ92526 530 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 SGCZQ96LD1 299 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 LRGUKQ96M69 825 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 TEX13BQ9BXU2 312 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 ZNF287Q9HBT7 754 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 KMT5AQ9NQR1 393 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 ECHDC1Q9NTX5 307 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 FBXO28Q9NVF7 368 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 FNIP2Q9P278 1114 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 ASH2LQ9UBL3 628 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 ZHX1Q9UKY1 873 aaPredicted RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 ISY1Q9ULR0 285 aaKnown RBP7.34□□□□□ -1.23
CLK1-212ENST00000482590 TTLL3Q9Y4R7 772 aa7.34□□□□□ -1.23
CLK1-212ENST00000482590 EYSQ5T1H1 3165 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 FAM170AA1A519 330 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 SMIM22K7EJ46 135 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 MUSKO15146 869 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 GPAA1O43292 621 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 OPA1O60313 960 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 KLHL18O94889 574 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 PGK1P00558 417 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 ZFYP08048 801 aaPredicted RBP7.33□□□□□ -1.24
CLK1-212ENST00000482590 CLTBP09497 229 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 GNAT2P19087 354 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 CAPN3P20807 821 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 CLK1P49759 484 aaKnown RBP7.33□□□□□ -1.24
CLK1-212ENST00000482590 ERVK-21P61565 698 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 TRIM14Q14142 442 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 ZNF460Q14592 562 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 PCBP2Q15366 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLK1-212ENST00000482590 SBK1Q52WX2 424 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 PRR16Q569H4 304 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 SLC35F1Q5T1Q4 408 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 FAM109BQ6ICB4 259 aaPredicted RBP7.33□□□□□ -1.24
CLK1-212ENST00000482590 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 USP51Q70EK9 711 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 BRAPQ7Z569 592 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 CATIPQ7Z7H3 387 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 KBTBD3Q8NAB2 608 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 GSTCDQ8NEC7 633 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 BADQ92934 168 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 HSPBAP1Q96EW2 488 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 NELL2Q99435 816 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 PCED1AQ9H1Q7 454 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 STARD7Q9NQZ5 370 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 SH3GLB2Q9NR46 395 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 NYAP2Q9P242 653 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 PDP2Q9P2J9 529 aa7.33□□□□□ -1.24
CLK1-212ENST00000482590 ADAMTS5Q9UNA0 930 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms