RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 WEE1P30291 646 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 VAMP7P51809 220 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 CLDN10P78369 228 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 USP4Q13107 963 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 RUNX3Q13761 415 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 LRRC32Q14392 662 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 ZNF77Q15935 545 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 ACOT1Q86TX2 421 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 FAM35AQ86V20 835 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 RALGPS2Q86X27 583 aaPredicted RBP11.15□□□□□ -0.62
CPSF4-212ENST00000482251 DCLK2Q8N568 766 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 ATRIPQ8WXE1 791 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 CHFRQ96EP1 664 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 MSANTD3Q96H12 275 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 FAM83CQ9BQN1 747 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 KRT82Q9NSB4 513 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 FAM49BQ9NUQ9 324 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.62
CPSF4-212ENST00000482251 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 KIF20AO95235 890 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 ASPAP45381 313 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 GCLMP48507 274 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 IFNAR2P48551 515 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 CCR3P51677 355 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 AP3M2P53677 418 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 DMWDQ09019 674 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 TAF10Q12962 218 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 LPAL2Q16609 132 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 ZACNQ401N2 412 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 HEATR6Q6AI08 1181 aaKnown RBP11.14□□□□□ -0.63
CPSF4-212ENST00000482251 PKN3Q6P5Z2 889 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 SH3RF2Q8TEC5 729 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 JAKMIP2Q96AA8 810 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 KCNK16Q96T55 309 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 DUS2Q9NX74 493 aaKnown RBP11.14□□□□□ -0.63
CPSF4-212ENST00000482251 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 SMG5Q9UPR3 1016 aaKnown RBP11.14□□□□□ -0.63
CPSF4-212ENST00000482251 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 PCDHGA2Q9Y5H1 932 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 MYO16Q9Y6X6 1858 aa11.14□□□□□ -0.63
CPSF4-212ENST00000482251 ATP8B3O60423 1300 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 GOLGA6L4A6NEF3 574 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 TDGF1P13385 188 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 KRT13P13646 458 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 HDCP19113 662 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 CD58P19256 250 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 ADORA2BP29275 332 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 NDST1P52848 882 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 SLC5A3P53794 718 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 ZXDBP98169 803 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 CCINQ13939 588 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 FSTL4Q6MZW2 842 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 C1orf228Q6PIY5 440 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 FMR1NBQ8N0W7 255 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 GUF1Q8N442 669 aaKnown RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 CPA6Q8N4T0 437 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 SUMF1Q8NBK3 374 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 TAS1R2Q8TE23 839 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 FBXO32Q969P5 355 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 TTLL2Q9BWV7 592 aa11.13□□□□□ -0.63
CPSF4-212ENST00000482251 APOBEC3GQ9HC16 384 aaKnown RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 POLR3BQ9NW08 1133 aaPredicted RBP11.13□□□□□ -0.63
CPSF4-212ENST00000482251 ZNF840PA6NDX5 716 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 CHURC1-FNTBB4DL54 471 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 LEFTY2O00292 366 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 AP1G2O75843 785 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ASS1P00966 412 aaKnown RBP11.12□□□□□ -0.63
CPSF4-212ENST00000482251 EGFP01133 1207 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 P4HA1P13674 534 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 CXCL12P48061 93 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 FNTBP49356 437 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 MLLT6P55198 1093 aaPredicted RBP11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ADAM9Q13443 819 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 EML3Q32P44 896 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 ZCWPW2Q504Y3 356 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 DGKKQ5KSL6 1271 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 PRR23BQ6ZRT6 265 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 PAQR9Q6ZVX9 377 aa11.12□□□□□ -0.63
CPSF4-212ENST00000482251 INTS8Q75QN2 995 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms