RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 ZBP1Q9H171 429 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
IFT88-206ENST00000482172 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
IFT88-206ENST00000482172 FNIP2Q9P278 1114 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 HSFX1Q9UBD0 423 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 MAFFQ9ULX9 164 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
IFT88-206ENST00000482172 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 SIGLEC16A6NMB1 481 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 LILRB3O75022 631 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 BEST1O76090 585 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 MOCS3O95396 460 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 ERBB2P04626 1255 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 CPB1P15086 417 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 BDNFP23560 247 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 CTNNB1P35222 781 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 RGS19P49795 217 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 RABGGTBP53611 331 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 NAP1L1P55209 391 aaKnown RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 GNG11P61952 73 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 MAMLD1Q13495 774 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 TPGS2Q68CL5 300 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 SCML4Q8N228 414 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 ZMIZ2Q8NF64 920 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 TPCN2Q8NHX9 752 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 C16orf45Q96MC5 204 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
IFT88-206ENST00000482172 ST7Q9NRC1 585 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 COG5Q9UP83 839 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
IFT88-206ENST00000482172 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 HHLA1C9JL84 531 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 E5RJQ4 531 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 H0YGN5 161 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 TULP2O00295 520 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 TRIM66O15016 1216 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
IFT88-206ENST00000482172 BUB1O43683 1085 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 GABBR2O75899 941 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 ABLIM3O94929 683 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 FBXO21O94952 628 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 TNNT1P13805 278 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 RGS7P49802 495 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 MAP3K7CLP57077 242 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 ROR1Q01973 937 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 RAB33AQ14088 237 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 RAB41Q5JT25 222 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 DNAJC24Q6P3W2 148 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 ARCQ7LC44 396 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
IFT88-206ENST00000482172 SELENOOQ9BVL4 669 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 CDY1Q9Y6F8 540 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 PTPRDP23468 1912 aa13.17□□□□□ -0.3
IFT88-206ENST00000482172 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 GRID2IPA4D2P6 1211 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 TMEM191CA6NGB0 347 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 GRXCR1A8MXD5 290 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 PAPSS1O43252 624 aaPredicted RBP13.16□□□□□ -0.3
IFT88-206ENST00000482172 SART1O43290 800 aaKnown RBP13.16□□□□□ -0.3
IFT88-206ENST00000482172 KRT3P12035 628 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 OR1D2P34982 312 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 GRIK1P39086 918 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 CACNA2D1P54289 1103 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 ERVK-21P61565 698 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 SLC6A3Q01959 620 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 RAB30Q15771 203 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 FAM109BQ6ICB4 259 aaPredicted RBP13.16□□□□□ -0.3
IFT88-206ENST00000482172 OR6B2Q6IFH4 312 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 C11orf63Q6NUN7 778 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 LRRC57Q8N9N7 239 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
IFT88-206ENST00000482172 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
IFT88-206ENST00000482172 KCNK16Q96T55 309 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms