RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 AFG1LQ8WV93 481 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 XAB2Q9HCS7 855 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 PIH1D1Q9NWS0 290 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 IRAK4Q9NWZ3 460 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ARHGAP20Q9P2F6 1191 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 MTF2Q9Y483 593 aaPredicted RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 ISM1B1AKI9 464 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 FGF10O15520 208 aaPredicted RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 USP1O94782 785 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 MMEP08473 750 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 SYN1P17600 705 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ALOX12P18054 663 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 GARSP41250 739 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 KCNC1P48547 511 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 RGS3P49796 1198 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ADARP55265 1226 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 BCAR1P56945 870 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 CREB5Q02930 508 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ARMC4Q5T2S8 1044 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 CLEC17AQ6ZS10 378 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 FAM214BQ7L5A3 538 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 BEND7Q8N7W2 519 aaPredicted RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 FANCBQ8NB91 859 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 IPMKQ8NFU5 416 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ASB15Q8WXK1 588 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 THAP4Q8WY91 577 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 NCSTNQ92542 709 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 GATA6Q92908 595 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 STRA6Q9BX79 667 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 CEP41Q9BYV8 373 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 DPH1Q9BZG8 443 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ABHD16BQ9H3Z7 469 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 MKNK2Q9HBH9 465 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 RPS6KA6Q9UK32 745 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 SF3B6Q9Y3B4 125 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 PCDHA1Q9Y5I3 950 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 CDY2AQ9Y6F7 541 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ZFP37Q9Y6Q3 630 aaPredicted RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 H3BUI4 141 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 IFNL4K9M1U5 179 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 GAS2O43903 313 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 PRPF6O94906 941 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 ENDOD1O94919 500 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 NR2F1P10589 423 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 MAP4P27816 1152 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 KCNAB2Q13303 367 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 EPHA7Q15375 998 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 NFRKBQ6P4R8 1299 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 SLC2A7Q6PXP3 512 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 CATSPERGQ6ZRH7 1159 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 TMTC3Q6ZXV5 915 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 FAM20CQ8IXL6 584 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 OTUD6BQ8N6M0 293 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 TOP6BLQ8N6T0 577 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 EID2BQ96D98 161 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 RNF125Q96EQ8 232 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 TMEM237Q96Q45 408 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 ASPNQ9BXN1 380 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 SACM1LQ9NTJ5 587 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 DCAF16Q9NXF7 216 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 AFF4Q9UHB7 1163 aaKnown RBP3.66□□□□□ -1.82
SMC6-208ENST00000481708 BLOC1S6Q9UL45 172 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 NUMBLQ9Y6R0 609 aa3.66□□□□□ -1.82
SMC6-208ENST00000481708 A0A0A6YYK5 440 aaPredicted RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 CLCA1A8K7I4 914 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 SART1O43290 800 aaKnown RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 DTNBO60941 627 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 TBX10O75333 385 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 BEST1O76090 585 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 TMEM63AO94886 807 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 MYL4P12829 197 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 KLRK1P26718 216 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 IL12RB1P42701 662 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 CHRNA4P43681 627 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 TMF1P82094 1093 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 PLIN5Q00G26 463 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 MGAT2Q10469 447 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 NMIQ13287 307 aaPredicted RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 FGL2Q14314 439 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 NR0B2Q15466 257 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 KHDC1Q4VXA5 237 aaKnown RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 C1orf141Q5JVX7 400 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 MFSD5Q6N075 450 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 TAF2Q6P1X5 1199 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 ALKBH5Q6P6C2 394 aaKnown RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 UNC13DQ70J99 1090 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 CEP68Q76N32 757 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 NME9Q86XW9 330 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 UTP4Q969X6 686 aaKnown RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 NMD3Q96D46 503 aaKnown RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 SOX7Q9BT81 388 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 SSBP4Q9BWG4 385 aaPredicted RBP3.65□□□□□ -1.82
SMC6-208ENST00000481708 C2orf40Q9H1Z8 148 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 CLDND1Q9NY35 253 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 PRR13Q9NZ81 148 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 RGL1Q9NZL6 768 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 CYP46A1Q9Y6A2 500 aa3.65□□□□□ -1.82
SMC6-208ENST00000481708 NPHP3-ACAD11A0A0J9YXS1 232 aa3.65□□□□□ -1.83
SMC6-208ENST00000481708 A0A1W2PPL8 197 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms