RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 CDC25CP30307 473 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 GTF2H1P32780 548 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 CLCN5P51795 746 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 STARD6P59095 220 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 APBA1Q02410 837 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 NHLH1Q02575 133 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TAF10Q12962 218 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 PAK1Q13153 545 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 FZD5Q13467 585 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TXNDC11Q6PKC3 985 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 CLEC17AQ6ZS10 378 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 CCDC105Q8IYK2 499 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TAF4BQ92750 862 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRMT2BQ96GJ1 504 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 DDX23Q9BUQ8 820 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 SRRTQ9BXP5 876 aaKnown RBP12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 RNF38Q9H0F5 515 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 GTSE1Q9NYZ3 720 aa12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF1-207ENST00000481260 TICRRQ7Z2Z1 1910 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 HHLA1C9JL84 531 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 AP1G2O75843 785 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 RAD23BP54727 409 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 MAP3K7CLP57077 242 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 ENPEPQ07075 957 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 DPCR1Q3MIW9 517 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARHGAP15Q53QZ3 475 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 FILIP1Q7Z7B0 1213 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 UBR7Q8N806 425 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 WBP2Q969T9 261 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 GCNAQ96QF7 691 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 TTLL2Q9BWV7 592 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 CISHQ9NSE2 258 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 NDRG2Q9UN36 371 aaKnown RBP12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 COQ4Q9Y3A0 265 aa12.11□□□□□ -0.47
RAPGEF1-207ENST00000481260 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 FAM170BA6NMN3 283 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 TULP2O00295 520 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZNF263O14978 683 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRIM66O15016 1216 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 FGF19O95750 216 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ABL1P00519 1130 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ANXA13P27216 316 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 FMO5P49326 533 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 SLC5A3P53794 718 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 STIM1Q13586 685 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 PPP1R26Q5T8A7 1209 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 CLEC20AQ6ZU45 233 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 FRMD5Q7Z6J6 570 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 DTWD2Q8NBA8 298 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 GPR88Q9GZN0 384 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 C2orf42Q9NWW7 574 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 SMPD4Q9NXE4 827 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 GMIPQ9P107 970 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 SIT1Q9Y3P8 196 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 PIAS3Q9Y6X2 628 aa12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 NUP210Q8TEM1 1887 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF1-207ENST00000481260 ANAPC1Q9H1A4 1944 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 KANSL1LA0AUZ9 987 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 RNF225M0QZC1 329 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 P4HA1P13674 534 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 ACO1P21399 889 aaKnown RBP12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 WEE1P30291 646 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 CUL2Q13617 745 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 ZNF77Q15935 545 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 GJB7Q6PEY0 223 aa12.09□□□□□ -0.47
RAPGEF1-207ENST00000481260 UNC93AQ86WB7 457 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms