RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ABLIM3	O94929	683 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	PDE8B	O95263	885 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	ATXN1L	P0C7T5	689 aa	Known RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	MYB	P10242	640 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	VCAM1	P19320	739 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	UCP3	P55916	312 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	EMC10	Q5UCC4	262 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	MRPL10	Q7Z7H8	261 aa	Known RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	ZNF280B	Q86YH2	543 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	PPP1R35	Q8TAP8	253 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	ATG4A	Q8WYN0	398 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	GLG1	Q92896	1179 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	R3HDM4	Q96D70	268 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	NT5C1B	Q96P26	610 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	NUP88	Q99567	741 aa	Predicted RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	FSD1L	Q9BXM9	530 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	SLC12A5	Q9H2X9	1139 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	CCNL1	Q9UK58	526 aa	Predicted RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	NDRG4	Q9ULP0	352 aa	Known RBP	4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	PLEKHM1	Q9Y4G2	1056 aa		4.1	□□□□□ -1.75
CCNL1-223	ENST00000481173	CACNA1I	Q9P0X4	2223 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173		A1L4Q6	167 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	EXOC3	O60645	756 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	FGB	P02675	491 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	NPS	P0C0P6	89 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	NCL	P19338	710 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	SCP2	P22307	547 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	ATP5F1	P24539	256 aa	Predicted RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	IL1R2	P27930	398 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	LOXL3	P58215	753 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	E2F2	Q14209	437 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	TRIM71	Q2Q1W2	868 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	TPH2	Q8IWU9	490 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	ACRBP	Q8NEB7	543 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	DIS3L	Q8TF46	1054 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	XAGE5	Q8WWM1	108 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	MTFMT	Q96DP5	389 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	DAZAP1	Q96EP5	407 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	MRGPRX1	Q96LB2	322 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	RHOBTB2	Q9BYZ6	727 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	BRINP2	Q9C0B6	783 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	GLOD4	Q9HC38	313 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	CNNM1	Q9NRU3	951 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	SCAF8	Q9UPN6	1271 aa	Known RBP	4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	TMX2	Q9Y320	296 aa		4.09	□□□□□ -1.75
CCNL1-223	ENST00000481173	ADORA2A	P29274	412 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	SLC11A2	P49281	568 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	RAB27A	P51159	221 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	ANAPC15	P60006	121 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	RAB1A	P62820	205 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	FGL2	Q14314	439 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	TTF1	Q15361	905 aa	Predicted RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	RBMS2	Q15434	407 aa	Known RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	LY6K	Q17RY6	165 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZIK1	Q3SY52	487 aa	Predicted RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	DEPDC1	Q5TB30	811 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	KIRREL2	Q6UWL6	708 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	PARS2	Q7L3T8	475 aa	Known RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	COL23A1	Q86Y22	540 aa	Predicted RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	SLC15A4	Q8N697	577 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	C16orf52	Q8NHV5	167 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	STAG1	Q8WVM7	1258 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	JPH3	Q8WXH2	748 aa	Predicted RBP	4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	MARK4	Q96L34	752 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZNF180	Q9UJW8	692 aa		4.08	□□□□□ -1.76
CCNL1-223	ENST00000481173	hCG_2014768	A0A024R1R8	64 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173		A0A088AWK7	358 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	MYO1C	O00159	1063 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	FCHO1	O14526	889 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	AKAP10	O43572	662 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	UBXN7	O94888	489 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	VNN1	O95497	513 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	ALPL	P05186	524 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	KIT	P10721	976 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	CYP2A6	P11509	494 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	PRF1	P14222	555 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	HTR1B	P28222	390 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	PPIF	P30405	207 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	VIPR2	P41587	438 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	GPSM2	P81274	684 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	KRT17	Q04695	432 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	MCL1	Q07820	350 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	MYO1E	Q12965	1108 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZNF268	Q14587	947 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	CERKL	Q49MI3	558 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	DNAJC5G	Q8N7S2	189 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	PIGO	Q8TEQ8	1089 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	COQ8B	Q96D53	544 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	VCPIP1	Q96JH7	1222 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	MOGAT1	Q96PD6	335 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	ACO2	Q99798	780 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	FAM118B	Q9BPY3	351 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	CXorf36	Q9H7Y0	433 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	DDX56	Q9NY93	547 aa	Known RBP	4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	SHOC2	Q9UQ13	582 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	SH2B3	Q9UQQ2	575 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	MED16	Q9Y2X0	877 aa		4.07	□□□□□ -1.76
CCNL1-223	ENST00000481173	FAM90A10P	A6NDY2	464 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms