RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 MIGA2Q7L4E1 593 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 FASTKD5Q7L8L6 764 aaKnown RBP7.82□□□□□ -1.16
CBX3-206ENST00000481057 PQLC1Q8N2U9 271 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 MIER2Q8N344 545 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 REPS2Q8NFH8 660 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 C7orf25Q9BPX7 421 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 PDCD2LQ9BRP1 358 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 KRTAP9-9Q9BYP9 154 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 KRTAP9-4Q9BYQ2 154 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 LANCL2Q9NS86 450 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 KLHL42Q9P2K6 505 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 SLC45A1Q9Y2W3 748 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 SH3TC1Q8TE82 1336 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 CCDC154A6NI56 674 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 TCP10L2B9ZVM9 353 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 CXCL11O14625 94 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 HOXA3O43365 443 aaPredicted RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 IL33O95760 270 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 PROS1P07225 676 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 PF4V1P10720 104 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 SELENOPP49908 381 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 RBM5P52756 815 aaKnown RBP eCLIP7.81□□□□□ -1.16
CBX3-206ENST00000481057 PER3P56645 1201 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 EFEMP1Q12805 493 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 LRRC41Q15345 812 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 SF3B3Q15393 1217 aaKnown RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 C3orf36Q3SXR2 165 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 MAMDC4Q6UXC1 1216 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 ZNF572Q7Z3I7 529 aaPredicted RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 ZNF808Q8N4W9 903 aaPredicted RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 HDAC10Q969S8 669 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 NUP88Q99567 741 aaPredicted RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 SMPD4Q9NXE4 827 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 ZIM2Q9NZV7 527 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 ZNF70Q9UC06 446 aaPredicted RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 TRMT112Q9UI30 125 aaKnown RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 ZNF180Q9UJW8 692 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 G3BP2Q9UN86 482 aaKnown RBP7.81□□□□□ -1.16
CBX3-206ENST00000481057 ANKRD6Q9Y2G4 727 aa7.81□□□□□ -1.16
CBX3-206ENST00000481057 FGBP02675 491 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 ZSCAN20P17040 1043 aaPredicted RBP7.8□□□□□ -1.16
CBX3-206ENST00000481057 GUCY1A2P33402 732 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 PTPN7P35236 360 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
CBX3-206ENST00000481057 NFE2Q16621 373 aaPredicted RBP7.8□□□□□ -1.16
CBX3-206ENST00000481057 HS1BP3Q53T59 392 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 MFSD14BQ5SR56 506 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 GADL1Q6ZQY3 521 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 APBB1IPQ7Z5R6 666 aaPredicted RBP7.8□□□□□ -1.16
CBX3-206ENST00000481057 TMEM199Q8N511 208 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 CHST13Q8NET6 341 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 SOCS4Q8WXH5 440 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 CEP95Q96GE4 821 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 C8orf49Q96NF6 230 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 COA1Q9GZY4 146 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 MANSC1Q9H8J5 431 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
CBX3-206ENST00000481057 ANKFY1Q9P2R3 1169 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 ANGPTL2Q9UKU9 493 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 TCAF1Q9Y4C2 921 aa7.8□□□□□ -1.16
CBX3-206ENST00000481057 XDHP47989 1333 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 SIPA1L3O60292 1781 aaPredicted RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 CT47B1P0C2W7 299 aaPredicted RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 VCAM1P19320 739 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 ACO1P21399 889 aaKnown RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 SOWAHCQ53LP3 525 aaPredicted RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 DOK3Q7L591 496 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 ANKRD35Q8N283 1001 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 DCLK2Q8N568 766 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 CERS5Q8N5B7 392 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 FBXO18Q8NFZ0 1043 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 JPH3Q8WXH2 748 aaPredicted RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 FAM89AQ96GI7 184 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 EPC1Q9H2F5 836 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 LDAHQ9H6V9 325 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 TDRD3Q9H7E2 651 aaKnown RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 PNMA8BQ9ULN7 279 aaPredicted RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 RRP7AQ9Y3A4 280 aaKnown RBP7.79□□□□□ -1.16
CBX3-206ENST00000481057 MED23Q9ULK4 1368 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 NBEAQ8NFP9 2946 aa7.79□□□□□ -1.16
CBX3-206ENST00000481057 CAPN14A8MX76 684 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 RFPL1O75677 317 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 SCGB1D2O95969 90 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 PDGFBP01127 241 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 MYL6BP14649 208 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 ALOX15P16050 662 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 GNAT2P19087 354 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 HHEXQ03014 270 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 TAP1Q03518 808 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 SP140Q13342 867 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 IL10RAQ13651 578 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 RRP12Q5JTH9 1297 aaKnown RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 SPTY2D1Q68D10 685 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 ZNF585AQ6P3V2 769 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 PRRT2Q7Z6L0 340 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 RHOT1Q8IXI2 618 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 ELOA2Q8IYF1 753 aaPredicted RBP7.78□□□□□ -1.16
CBX3-206ENST00000481057 CASKIN2Q8WXE0 1202 aa7.78□□□□□ -1.16
CBX3-206ENST00000481057 MIEF2Q96C03 454 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms