RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 SLC17A8Q8NDX2 589 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 POC1BQ8TC44 478 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 DDX17Q92841 729 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 CAMK1GQ96NX5 476 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 MMS19Q96T76 1030 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 FSD1LQ9BXM9 530 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 SMOC2Q9H3U7 446 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 MRPL44Q9H9J2 332 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 CALCOCO1Q9P1Z2 691 aa2.41□□□□□ -2.02
R3HDM1-214ENST00000480793 ALG1L2C9J202 215 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 POLRMTO00411 1230 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 ACOT8O14734 319 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SOAT2O75908 522 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PLGP00747 810 aaPredicted RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 POU2F2P09086 479 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 ITGALP20701 1170 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PDCP20941 246 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 CD6P30203 668 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PHKA1P46020 1223 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 HK3P52790 923 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC16A1P53985 500 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 TCF15Q12870 199 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 CCDC93Q567U6 631 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 TMEM240Q5SV17 173 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 RBM20Q5T481 1227 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 EFCAB2Q5VUJ9 269 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 HIST2H2BCQ6DN03 193 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 KIRREL2Q6UWL6 708 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC30A10Q6XR72 485 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PPP1R32Q7Z5V6 425 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 RSPH3Q86UC2 560 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PNMA8AQ86V59 439 aaPredicted RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 ANKRD13BQ86YJ7 626 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 FAM109AQ8N4B1 249 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SPEM1Q8N4L4 309 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 CPA6Q8N4T0 437 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PLBD2Q8NHP8 589 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 B4GALNT2Q8NHY0 566 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SIGLEC11Q96RL6 698 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 EFHD1Q9BUP0 239 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 RTFDC1Q9BY42 306 aaPredicted RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 GTPBP4Q9BZE4 634 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SERHLQ9NQF3 203 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 SH2B3Q9UQQ2 575 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 PCDHA3Q9Y5H8 950 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 MMP24Q9Y5R2 645 aa2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 CFAP20Q9Y6A4 193 aaKnown RBP2.4□□□□□ -2.03
R3HDM1-214ENST00000480793 A0A087WYN8 130 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 TMEM232C9JQI7 657 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 DCLK1O15075 740 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC16A3O15427 465 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 TLR5O60602 858 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 EXOC3O60645 756 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 AHSGP02765 367 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 FGF3P11487 239 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 PLA2G2AP14555 144 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 CHRM3P20309 590 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 RECQLP46063 649 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 CLCN2P51788 898 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 PDE1AP54750 535 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 PSMC1P62191 440 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 NKX6-1P78426 367 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 MCL1Q07820 350 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 DDR1Q08345 913 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 NOGQ13253 232 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SF3B4Q15427 424 aaKnown RBP eCLIP2.39□□□□□ -2.038e-7■■■■□ 23.2
R3HDM1-214ENST00000480793 INPP5JQ15735 1006 aaPredicted RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 PTPROQ16827 1216 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 TAF2Q6P1X5 1199 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 USP45Q70EL2 814 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 TTC7BQ86TV6 843 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 RAVER1Q8IY67 606 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SLITRK1Q96PX8 696 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 RHOBTB2Q9BYZ6 727 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 MRPL46Q9H2W6 279 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SLC12A5Q9H2X9 1139 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 GPR35Q9HC97 309 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 TCF7L1Q9HCS4 588 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 SAP30BPQ9UHR5 308 aaKnown RBP2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 EVPLQ92817 2033 aa2.39□□□□□ -2.03
R3HDM1-214ENST00000480793 ZNF785A8K8V0 405 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 PPM1DO15297 605 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 TLR2O60603 784 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 RNF8O76064 485 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 KIF20AO95235 890 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 A1BGP04217 495 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 ALDH2P05091 517 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 GJB1P08034 283 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 PDHA1P08559 390 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 TYRP14679 529 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 HDCP19113 662 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 TNFRSF8P28908 595 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 NEK2P51955 445 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 ZNF135P52742 658 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 RPL36AP83881 106 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 SP2Q02086 613 aa2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 HABP2Q14520 560 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-214ENST00000480793 ZNF267Q14586 743 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms