RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CASP1P29466 404 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 HOXA6P31267 233 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 IFNAR2P48551 515 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 TUBP50607 506 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 VAMP7P51809 220 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 MYL6P60660 151 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 USP4Q13107 963 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 STIM1Q13586 685 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 MDH1BQ5I0G3 518 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 TXNDC8Q6A555 127 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 POTEHQ6S545 545 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 NUP93Q8N1F7 819 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 PNPLA8Q9NP80 782 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 CRTAC1Q9NQ79 661 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 GTSE1Q9NYZ3 720 aa12.18□□□□□ -0.46
CCM2-213ENST00000480658 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 F8VP50 259 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 TRDMT1O14717 391 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 LILRB5O75023 590 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 LRRN2O75325 713 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 ASS1P00966 412 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 C4BPAP04003 597 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 YWHAQP27348 245 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 SLC7A9P82251 487 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 FZD5Q13467 585 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 CCINQ13939 588 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 ZNF77Q15935 545 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 TADA2BQ86TJ2 420 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 ELOA2Q8IYF1 753 aaPredicted RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 FAM186BQ8IYM0 893 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 MAML2Q8IZL2 1156 aaPredicted RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 ACDQ96AP0 544 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 OTUB2Q96DC9 234 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 RSPRY1Q96DX4 576 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 TIGD1Q96MW7 591 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 TMEM8AQ9HCN3 771 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 DUS2Q9NX74 493 aaKnown RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 TBC1D14Q9P2M4 693 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 NCDNQ9UBB6 729 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 GMEB2Q9UKD1 530 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 ZDHHC9Q9Y397 364 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 R4GN57 208 aa12.17□□□□□ -0.46
CCM2-213ENST00000480658 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
CCM2-213ENST00000480658 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
CCM2-213ENST00000480658 CETN3O15182 167 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 SLC16A3O15427 465 aaKnown RBP12.16□□□□□ -0.46
CCM2-213ENST00000480658 LRP3O75074 770 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 TADA3O75528 432 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 GPR15P49685 360 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 SLC8A3P57103 927 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 ADAM9Q13443 819 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 TMEM196Q5HYL7 178 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 KRT39Q6A163 491 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 LONP2Q86WA8 852 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 CAMKK1Q8N5S9 505 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
CCM2-213ENST00000480658 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 MED10Q9BTT4 135 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 DOCK6Q96HP0 2047 aa12.16□□□□□ -0.46
CCM2-213ENST00000480658 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 SHISA7A6NL88 538 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 ATP2C2O75185 946 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 OLFM2O95897 454 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ADH1CP00326 375 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 FAM200BP0CF97 657 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 EIF2DP41214 584 aaKnown RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 CASP4P49662 377 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 PSEN1P49768 467 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 FKBP3Q00688 224 aaKnown RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 PON2Q15165 354 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ZNF658Q5TYW1 1059 aaPredicted RBP12.15□□□□□ -0.46
CCM2-213ENST00000480658 SDHAF4Q5VUM1 108 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 SNX30Q5VWJ9 437 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 LAIR1Q6GTX8 287 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ERMP1Q7Z2K6 904 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 FAM35AQ86V20 835 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 C11orf74Q86VG3 221 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.46
CCM2-213ENST00000480658 ARL14EPQ8N8R7 260 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms