RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 DNAI2Q9GZS0 605 aa12.8□□□□□ -0.36
CCM2-212ENST00000480382 EPHX3Q9H6B9 360 aa12.8□□□□□ -0.36
CCM2-212ENST00000480382 IGSF9Q9P2J2 1179 aa12.8□□□□□ -0.36
CCM2-212ENST00000480382 UXTQ9UBK9 157 aaPredicted RBP12.8□□□□□ -0.36
CCM2-212ENST00000480382 SORCS3Q9UPU3 1222 aa12.8□□□□□ -0.36
CCM2-212ENST00000480382 PCDHB4Q9Y5E5 795 aa12.8□□□□□ -0.36
CCM2-212ENST00000480382 KIF26AQ9ULI4 1882 aaPredicted RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 PI4K2BG5E9Z4 385 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 NARSO43776 548 aaKnown RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 F11P03951 625 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 ALADP13716 330 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 PON1P27169 355 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 SLC5A3P53794 718 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 ZXDAP98168 799 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 TDGQ13569 410 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 FAM78AQ5JUQ0 283 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 RBBP8NLQ8NC74 664 aaPredicted RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 JAKMIP2Q96AA8 810 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 CEP295NLQ96MC4 621 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 RPP25Q9BUL9 199 aaKnown RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 HSD3B7Q9H2F3 369 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 UBE2TQ9NPD8 197 aaPredicted RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 AJAP1Q9UKB5 411 aaPredicted RBP12.79□□□□□ -0.36
CCM2-212ENST00000480382 NCANO14594 1321 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 COL4A2P08572 1712 aa12.79□□□□□ -0.36
CCM2-212ENST00000480382 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 CALCAP01258 141 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 CD19P15391 556 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 ZNF18P17022 549 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 NPR3P17342 541 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 GOLGA7BQ2TAP0 167 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 GPRIN1Q7Z2K8 1008 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
CCM2-212ENST00000480382 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 SLC44A3Q8N4M1 653 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 SCAMP5Q8TAC9 235 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
CCM2-212ENST00000480382 SMARCD2Q92925 531 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 NXPE3Q969Y0 559 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 GPR88Q9GZN0 384 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 VPS16Q9H269 839 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
CCM2-212ENST00000480382 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 RTN3O95197 1032 aaPredicted RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 PRAMEF12O95522 483 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 TPM2P07951 284 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 VDRP11473 427 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 KRT5P13647 590 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 VIPR2P41587 438 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 ZNF165P49910 485 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 ZNF132P52740 706 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 MFAP3P55082 362 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 KCNMA1Q12791 1236 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 NFKBIBQ15653 356 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 TXNDC8Q6A555 127 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 TTC30AQ86WT1 665 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 MAB21L3Q8N8X9 362 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 EDAQ92838 391 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 LSM14BQ9BX40 385 aaKnown RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 TASP1Q9H6P5 420 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 LIMA1Q9UHB6 759 aaKnown RBP12.77□□□□□ -0.37
CCM2-212ENST00000480382 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 TECTAO75443 2155 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 COL4A3Q01955 1670 aa12.77□□□□□ -0.37
CCM2-212ENST00000480382 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 O00370 1275 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 ECI2O75521 394 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 PAEPP09466 180 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 ATP1A3P13637 1013 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
CCM2-212ENST00000480382 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
CCM2-212ENST00000480382 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCM2-212ENST00000480382 YWHAQP27348 245 aa12.76□□□□□ -0.37
CCM2-212ENST00000480382 TAF10Q12962 218 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms