RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 RPLP0P6Q8NHW5 317 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 POMGNT1Q8WZA1 660 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 ZNF560Q96MR9 790 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 DUS2Q9NX74 493 aaKnown RBP11.11□□□□□ -0.63
SMURF1-204ENST00000480055 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 NBEAQ8NFP9 2946 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 GON4LQ3T8J9 2241 aa11.11□□□□□ -0.63
SMURF1-204ENST00000480055 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 SRRM3A6NNA2 597 aaPredicted RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 TISP43B9A030 160 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 DCLK1O15075 740 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 SLC26A4O43511 780 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 APBB3O95704 486 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 TOP3BO95985 862 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 F11P03951 625 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 CSH1P0DML2 217 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 CSH2P0DML3 217 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 CEACAM1P13688 526 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 GJA4P35212 333 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 IFNAR2P48551 515 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 RPL10AP62906 217 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 GTF2BQ00403 316 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 NFE2Q16621 373 aaPredicted RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 FBXO43Q4G163 708 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 PMS2CLQ68D20 193 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 TMEM150AQ86TG1 271 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 MON1AQ86VX9 555 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 RAD54LQ92698 747 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 CD101Q93033 1021 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 ACDQ96AP0 544 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 SCNM1Q9BWG6 230 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 FBRSL1Q9HCM7 1045 aaKnown RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
SMURF1-204ENST00000480055 UXTQ9UBK9 157 aaPredicted RBP11.1□□□□□ -0.63
SMURF1-204ENST00000480055 PTPRBP23467 1997 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 HUS1O60921 280 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 IL18RAPO95256 599 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 CKMP06732 381 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 KRT19P08727 400 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 HMGA1P17096 107 aaKnown RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 PLCG1P19174 1290 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 PNPLA4P41247 253 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 SLC19A1P41440 591 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 DGKEP52429 567 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 ZNF131P52739 623 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 MYL7Q01449 175 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 NR1H3Q13133 447 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 DMC1Q14565 340 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 MTF1Q14872 753 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 DDR2Q16832 855 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 NAIF1Q69YI7 327 aaPredicted RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 C11orf74Q86VG3 221 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 TTC30AQ86WT1 665 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 OSCP1Q8WVF1 389 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 KCNN1Q92952 543 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 CYP2S1Q96SQ9 504 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 ECT2Q9H8V3 914 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 TMLHEQ9NVH6 421 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 DDX43Q9NXZ2 648 aaKnown RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 AGAP1Q9UPQ3 857 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
SMURF1-204ENST00000480055 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 PLXNB3Q9ULL4 1909 aa11.09□□□□□ -0.63
SMURF1-204ENST00000480055 TRAV19A0A0A6YYK7 116 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CDX4O14627 284 aaPredicted RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 ITGB3P05106 788 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CYP2F1P24903 491 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 GJB2P29033 226 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 POLR2BP30876 1174 aaKnown RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 LONP1P36776 959 aaKnown RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 SEC13P55735 322 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 POSTNQ15063 836 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 DYMQ7RTS9 669 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 NT5DC4Q86YG4 428 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 SPATA2LQ8IUW3 424 aaPredicted RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 SCN4BQ8IWT1 228 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 EFCAB13Q8IY85 973 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 PDCL2Q8N4E4 241 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CSGALNACT2Q8N6G5 542 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 TSTD1Q8NFU3 115 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CCDC26Q8TAB7 109 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 LARP4BQ92615 738 aaKnown RBP11.08□□□□□ -0.64
SMURF1-204ENST00000480055 ACBD6Q9BR61 282 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 CCSER1Q9C0I3 900 aa11.08□□□□□ -0.64
SMURF1-204ENST00000480055 MRPL44Q9H9J2 332 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms