RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 FAM105AQ9NUU6 356 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 MAP3K20Q9NYL2 800 aaKnown RBP4.4□□□□□ -1.71
COPS7B-220ENST00000479430 WHRNQ9P202 907 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
COPS7B-220ENST00000479430 RCAN3Q9UKA8 241 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 OBSL1O75147 1896 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 TCHHQ07283 1943 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 ZMYM6O95789 1325 aa4.4□□□□□ -1.71
COPS7B-220ENST00000479430 TMEM131Q92545 1883 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TCRBV16S1A1N1A0A5B0 115 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PATE3B3GLJ2 98 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 GABRDO14764 452 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 HYAL3O43820 417 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 EDIL3O43854 480 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 RNGTTO60942 597 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 STAM2O75886 525 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NPTXRO95502 500 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SOD2P04179 222 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 ALDH2P05091 517 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SRGAP2CP0DJJ0 459 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 CCNE1P24864 410 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 U2AF2P26368 475 aaKnown RBP eCLIP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 MLH1P40692 756 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 VIPR2P41587 438 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 GLUD2P49448 558 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NOVA1P51513 510 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NAPAP54920 295 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NPEPPSP55786 919 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TMPRSS15P98073 1019 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PRKCEQ02156 737 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PRSS53Q2L4Q9 553 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 UAP1L1Q3KQV9 507 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SOWAHCQ53LP3 525 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 RNFT1Q5M7Z0 435 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 RTP2Q5QGT7 225 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 HP1BP3Q5SSJ5 553 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 UBXN11Q5T124 520 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 STPG1Q5TH74 334 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 FAM160B1Q5W0V3 765 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NAIF1Q69YI7 327 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 GTF2IRD2BQ6EKJ0 949 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 RSPO2Q6UXX9 243 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NFXL1Q6ZNB6 911 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 CEP68Q76N32 757 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 CATSPER4Q7RTX7 472 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 GTF2IRD2Q86UP8 949 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 COLGALT2Q8IYK4 626 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 CNTD1Q8N815 330 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SMG8Q8ND04 991 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 IGDCC4Q8TDY8 1250 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PTPRN2Q92932 1015 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SECISBP2LQ93073 1101 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PHKBQ93100 1093 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 ISL2Q96A47 359 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TMEM143Q96AN5 459 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 ZFYVE19Q96K21 471 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 MAGEB10Q96LZ2 347 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 ZSWIM3Q96MP5 696 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 MAP7D2Q96T17 732 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TTC1Q99614 292 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 DDX23Q9BUQ8 820 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PHF20Q9BVI0 1012 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 HERC2P3Q9BVR0 1158 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SCNM1Q9BWG6 230 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TMPRSS13Q9BYE2 586 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 KRT23Q9C075 422 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 POLD4Q9HCU8 107 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SSU72Q9NP77 194 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 DIAPH3Q9NSV4 1193 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 SEC63Q9UGP8 760 aaKnown RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 KLK13Q9UKR3 277 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 FBXO4Q9UKT5 387 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 TRHDEQ9UKU6 1024 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 RAB23Q9ULC3 237 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 CEP131Q9UPN4 1083 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PCDHB2Q9Y5E7 798 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PCDHGA2Q9Y5H1 932 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 IRAK3Q9Y616 596 aa4.39□□□□□ -1.71
COPS7B-220ENST00000479430 NUP210Q8TEM1 1887 aaPredicted RBP4.39□□□□□ -1.71
COPS7B-220ENST00000479430 MYLKQ15746 1914 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 MYH11P35749 1972 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 TP53BP1Q12888 1972 aaPredicted RBP4.38□□□□□ -1.71
COPS7B-220ENST00000479430 IGLV3-22A0A075B6J6 115 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 FSD2A1L4K1 749 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 SMCO2A6NFE2 343 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 CASTOR2A6NHX0 329 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 SLC38A8A6NNN8 435 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 C4orf47A7E2U8 309 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 CCER2I3L3R5 266 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 MEIS1O00470 390 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 EXTL3O43909 919 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 TBC1D4O60343 1298 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 BRINP1O60477 761 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 WISP1O95388 367 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 CRTAMO95727 393 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 IGHDP01880 384 aa4.38□□□□□ -1.71
COPS7B-220ENST00000479430 C8AP07357 584 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms