RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 KHSRPQ92945 711 aaKnown RBP eCLIP21.7■■□□□ 1.06
VARS-224ENST00000479051 E2F7Q96AV8 911 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 ASB16Q96NS5 453 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 SLITRK1Q96PX8 696 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 KCNK16Q96T55 309 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 TTLL2Q9BWV7 592 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 CSNK1G1Q9HCP0 422 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 COMMD8Q9NX08 183 aa21.7■■□□□ 1.06
VARS-224ENST00000479051 ECI2O75521 394 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 F11P03951 625 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 VDRP11473 427 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 NPR3P17342 541 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 SLC9A1P19634 815 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 ACO1P21399 889 aaKnown RBP21.69■■□□□ 1.06
VARS-224ENST00000479051 PON1P27169 355 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 ZNF165P49910 485 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 MAP3K7CLP57077 242 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 KRT31Q15323 416 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 FAM78AQ5JUQ0 283 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 FKBP15Q5T1M5 1219 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 PPP1R26Q5T8A7 1209 aaPredicted RBP21.69■■□□□ 1.06
VARS-224ENST00000479051 RSAD2Q8WXG1 361 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 FGF14Q92915 247 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 KAT5Q92993 513 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 ELSPBP1Q96BH3 223 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 TMEM30AQ9NV96 361 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 TRPM5Q9NZQ8 1165 aa21.69■■□□□ 1.06
VARS-224ENST00000479051 BECN2A8MW95 431 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 KRT5P13647 590 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 YWHAQP27348 245 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 PDE6CP51160 858 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 IFRD2Q12894 506 aaPredicted RBP21.68■■□□□ 1.06
VARS-224ENST00000479051 SLC44A3Q8N4M1 653 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 RBBP8NLQ8NC74 664 aaPredicted RBP21.68■■□□□ 1.06
VARS-224ENST00000479051 PDZD8Q8NEN9 1154 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 ZSWIM3Q96MP5 696 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 KREMEN1Q96MU8 473 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 SMOQ99835 787 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 KXD1Q9BQD3 176 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 DUSP16Q9BY84 665 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 FBXO44Q9H4M3 255 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 EPHX3Q9H6B9 360 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 TRPV4Q9HBA0 871 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 PNPLA8Q9NP80 782 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 HESX1Q9UBX0 185 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 DUSP12Q9UNI6 340 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 MYO10Q9HD67 2058 aa21.68■■□□□ 1.06
VARS-224ENST00000479051 MYH10P35580 1976 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 NRG2O14511 850 aaPredicted RBP21.67■■□□□ 1.06
VARS-224ENST00000479051 DPYSL4O14531 572 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 CAVIN2O95810 425 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 AVPR1AP37288 418 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 SLC5A3P53794 718 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 USP46P62068 366 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 STILQ15468 1287 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 ZSCAN23Q3MJ62 389 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 STXBP5Q5T5C0 1151 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 SMYD5Q6GMV2 418 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 CLEC20AQ6ZU45 233 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 TMEM150AQ86TG1 271 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 FBXO32Q969P5 355 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 FUCA2Q9BTY2 467 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 C1QTNF1Q9BXJ1 281 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 VPS16Q9H269 839 aa21.67■■□□□ 1.06
VARS-224ENST00000479051 SRFP11831 508 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 WEE1P30291 646 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 TPM4P67936 248 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 SIGLEC14Q08ET2 396 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 TAF10Q12962 218 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 NCAPHQ15003 741 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 TANGO2Q6ICL3 276 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 MON1AQ86VX9 555 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 ARID3BQ8IVW6 561 aaPredicted RBP21.66■■□□□ 1.06
VARS-224ENST00000479051 MAB21L3Q8N8X9 362 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 ANKRD52Q8NB46 1076 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 ZMIZ2Q8NF64 920 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 OVCA2Q8WZ82 227 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 TRPC7Q9HCX4 862 aa21.66■■□□□ 1.06
VARS-224ENST00000479051 LIMA1Q9UHB6 759 aaKnown RBP21.66■■□□□ 1.06
VARS-224ENST00000479051 GREB1Q4ZG55 1949 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 TRAV19A0A0A6YYK7 116 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 TNFRSF10BO14763 440 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 TADA3O75528 432 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 BEST1O76090 585 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 ZNF18P17022 549 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 PFKLP17858 780 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 RFX1P22670 979 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 COPB1P53618 953 aaKnown RBP21.65■■□□□ 1.06
VARS-224ENST00000479051 BCAT1P54687 386 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 ARHGAP44Q17R89 818 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 GOLGA7BQ2TAP0 167 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 TXNDC8Q6A555 127 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 CMTM8Q8IZV2 173 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 ST13P5Q8NFI4 369 aaPredicted RBP21.65■■□□□ 1.06
VARS-224ENST00000479051 DEPDC1BQ8WUY9 529 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 SLC46A2Q9BY10 475 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 TSPAN16Q9UKR8 245 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 CNTN6Q9UQ52 1028 aa21.65■■□□□ 1.06
VARS-224ENST00000479051 NCANO14594 1321 aa21.64■■□□□ 1.05
VARS-224ENST00000479051 ABL1P00519 1130 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms