RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 NBPF20Q3BBV1 942 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 TFDP3Q5H9I0 405 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 TXNRD3NBQ6F5E7 133 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 MGARPQ8TDB4 240 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 OSMRQ99650 979 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 CEP83Q9Y592 693 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 ACTL7BQ9Y614 415 aa28.91■■■□□ 2.22
CHKB-208ENST00000479003 B4GALT4O60513 344 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 YWHAEP62258 255 aaKnown RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 OASLQ15646 514 aaKnown RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 RIBC1Q8N443 379 aaPredicted RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 KCNK9Q9NPC2 374 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 STRIP2Q9ULQ0 834 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 OAS1P00973 400 aaKnown RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 GNRH1P01148 92 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 TNNC2P02585 160 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 ASGR1P07306 291 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 CDKN2BP42772 138 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 VCPP55072 806 aaKnown RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 SCARA5Q6ZMJ2 495 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 TMEM192Q8IY95 271 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 PXYLP1Q8TE99 480 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 CKAP2Q8WWK9 683 aa28.9■■■□□ 2.22
CHKB-208ENST00000479003 NKD2Q969F2 451 aaPredicted RBP28.9■■■□□ 2.22
CHKB-208ENST00000479003 FOXO6A8MYZ6 492 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 SNX3O60493 162 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 DNAJC8O75937 253 aaPredicted RBP28.89■■■□□ 2.22
CHKB-208ENST00000479003 ARSEP51690 589 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 MPP2Q14168 576 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 KCNA10Q16322 511 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 CYP4A22Q5TCH4 519 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 KLHDC9Q8NEP7 349 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 ANKRD36BP1Q96IX9 119 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 CFAP57Q96MR6 1250 aa28.89■■■□□ 2.22
CHKB-208ENST00000479003 TPX2Q9ULW0 747 aaKnown RBP28.89■■■□□ 2.22
CHKB-208ENST00000479003 POLNQ7Z5Q5 900 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 LHX5Q9H2C1 402 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 TCP11X1B4DZS4 312 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 ITGAVP06756 1048 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 ZSCAN5DPP0CG00 497 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 GNAT1P11488 350 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 CCDC142Q17RM4 750 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 CCSAPQ6IQ19 270 aaPredicted RBP28.88■■■□□ 2.21
CHKB-208ENST00000479003 DENND1BQ6P3S1 775 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 ANKRD42Q8N9B4 389 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 TTC25Q96NG3 672 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 SAYSD1Q9NPB0 183 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 KLC4Q9NSK0 619 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 SAGE1Q9NXZ1 904 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 TBK1Q9UHD2 729 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 GTF2IRD1Q9UHL9 959 aa28.88■■■□□ 2.21
CHKB-208ENST00000479003 LRRD1A4D1F6 860 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 GSTA1P08263 222 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 XRCC4Q13426 336 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 TMEM40Q8WWA1 233 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 GCOM2Q9BZD3 368 aaPredicted RBP28.87■■■□□ 2.21
CHKB-208ENST00000479003 ATP2C2O75185 946 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 ETS1P14921 441 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 POLR2BP30876 1174 aaKnown RBP28.87■■■□□ 2.21
CHKB-208ENST00000479003 CDC42EP1Q00587 391 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 GPS1Q13098 491 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 MORF4L2Q15014 288 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 PTPN20Q4JDL3 420 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 ACSF2Q96CM8 615 aaPredicted RBP28.87■■■□□ 2.21
CHKB-208ENST00000479003 POLIQ9UNA4 740 aa28.87■■■□□ 2.21
CHKB-208ENST00000479003 SIGLEC16A6NMB1 481 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 NDC80O14777 642 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 INHAP05111 366 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 WDR72Q3MJ13 1102 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 GDF6Q6KF10 455 aaPredicted RBP28.86■■■□□ 2.21
CHKB-208ENST00000479003 TRPM8Q7Z2W7 1104 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 MAML1Q92585 1016 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 EFR3BQ9Y2G0 817 aa28.86■■■□□ 2.21
CHKB-208ENST00000479003 C3orf70A6NLC5 250 aaPredicted RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 DARSP14868 501 aaKnown RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 PECAM1P16284 738 aaPredicted RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 CST5P28325 142 aaPredicted RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 BCO2Q9BYV7 579 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 PCDH9Q9HC56 1237 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 FGFR1OP2Q9NVK5 253 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 SLC12A4Q9UP95 1085 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 USP15Q9Y4E8 981 aaPredicted RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 A0A1B0GUA9 196 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 MED7O43513 233 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 CXCL8P10145 99 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 PSMA2P25787 234 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 RFC1P35251 1148 aaPredicted RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 SLC25A11Q02978 314 aaKnown RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 FAM47CQ5HY64 1035 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 RNASEH2BQ5TBB1 312 aaKnown RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 ARHGEF18Q6ZSZ5 1173 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 SRRM1Q8IYB3 904 aaKnown RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 FUKQ8N0W3 1084 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 SLC35B2Q8TB61 432 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 FNIP1Q8TF40 1166 aa28.85■■■□□ 2.21
CHKB-208ENST00000479003 NXF1Q9UBU9 619 aaKnown RBP28.85■■■□□ 2.21
CHKB-208ENST00000479003 IL18RAPO95256 599 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 MCF2P10911 925 aa28.84■■■□□ 2.21
CHKB-208ENST00000479003 HOXA11P31270 313 aaPredicted RBP28.84■■■□□ 2.21
CHKB-208ENST00000479003 SF3A3Q12874 501 aaKnown RBP eCLIP28.84■■■□□ 2.216e-7■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms