RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC8-217ENST00000478743 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 SPTAN1Q13813 2472 aaKnown RBP13.24□□□□□ -0.29
HDAC8-217ENST00000478743 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
HDAC8-217ENST00000478743 TRIM24O15164 1050 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 MED24O75448 989 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 USP17L7P0C7H9 530 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 GNSP15586 552 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
HDAC8-217ENST00000478743 IL9RQ01113 521 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 RESTQ13127 1097 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 DHCR24Q15392 516 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-217ENST00000478743 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 Q6ZUG5 572 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 FGF11Q92914 225 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 TMEM176AQ96HP8 235 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-217ENST00000478743 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 RAD54BQ9Y620 910 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
HDAC8-217ENST00000478743 KNTC1P50748 2209 aa13.23□□□□□ -0.29
HDAC8-217ENST00000478743 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 MEI4A8MW99 385 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 LEFTY2O00292 366 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 MCF2P10911 925 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 JUPP14923 745 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
HDAC8-217ENST00000478743 CYP11B2P19099 503 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC8-217ENST00000478743 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 DDR2Q16832 855 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 HES3Q5TGS1 186 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 KIAA1614Q5VZ46 1190 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 PIK3AP1Q6ZUJ8 805 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 MED8Q96G25 268 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 SNX11Q9Y5W9 270 aa13.22□□□□□ -0.29
HDAC8-217ENST00000478743 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 A0A0A0MRY4 1105 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 NDUFS2O75306 463 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 GP1BBP13224 206 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 NCAM1P13591 858 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 TCF3P15923 654 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-217ENST00000478743 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 WDR45BQ5MNZ6 344 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 MPZL3Q6UWV2 235 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
HDAC8-217ENST00000478743 TSC1Q92574 1164 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
HDAC8-217ENST00000478743 LGMNQ99538 433 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
HDAC8-217ENST00000478743 MYMKA6NI61 221 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 K7ERI5 159 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 NOL4O94818 638 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 ODC1P11926 461 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 GRIA2P42262 883 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 CSNK1EP49674 416 aaKnown RBP13.2□□□□□ -0.3
HDAC8-217ENST00000478743 EFNA5P52803 228 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 LILRA4P59901 499 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 NFATC3Q12968 1075 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 KIF19Q2TAC6 998 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 DCAF12L1Q5VU92 463 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 KIAA1324Q6UXG2 1013 aaKnown RBP13.2□□□□□ -0.3
HDAC8-217ENST00000478743 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-217ENST00000478743 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 ADGRG2Q8IZP9 1017 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 MRGPRX1Q96LB2 322 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 GPR174Q9BXC1 333 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-217ENST00000478743 SRPK3Q9UPE1 567 aa13.2□□□□□ -0.3
HDAC8-217ENST00000478743 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 BCAT2O15382 392 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-217ENST00000478743 ZNF217O75362 1048 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 CYP11A1P05108 521 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 CSH1P0DML2 217 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 CSH2P0DML3 217 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 ADH5P11766 374 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms