RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 USP46P62068 366 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 GCNT1Q02742 428 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 RAPGEF1Q13905 1077 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 ARHGAP15Q53QZ3 475 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 SGO2Q562F6 1265 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 GPR158Q5T848 1215 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 PAQR9Q6ZVX9 377 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 GPIHBP1Q8IV16 184 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 ZDHHC14Q8IZN3 488 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 UBR7Q8N806 425 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 RBBP8NLQ8NC74 664 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 FGF14Q92915 247 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 SPATA17Q96L03 361 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 C8orf48Q96LL4 319 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 ZSWIM3Q96MP5 696 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 SMOQ99835 787 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 BPIFA3Q9BQP9 254 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 LSM14BQ9BX40 385 aaKnown RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 LRRC3Q9BY71 257 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 HSD3B7Q9H2F3 369 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 SMOC2Q9H3U7 446 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KCNK12Q9HB15 430 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 TRPC7Q9HCX4 862 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 AVENQ9NQS1 362 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 EPS15L1Q9UBC2 864 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 UXTQ9UBK9 157 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 NUMBLQ9Y6R0 609 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 TICRRQ7Z2Z1 1910 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KIF26AQ9ULI4 1882 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 TECTAO75443 2155 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 SMTNL1A8MU46 457 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 MOSPD3O75425 235 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 NOL4O94818 638 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 FGF19O95750 216 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 ABL1P00519 1130 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF18P17022 549 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 NPR3P17342 541 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 ACO1P21399 889 aaKnown RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 KLK7P49862 253 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 COPB1P53618 953 aaKnown RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 SLC5A3P53794 718 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 HTR4Q13639 388 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 PTPN21Q16825 1174 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 GOLGA7BQ2TAP0 167 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 FKBP15Q5T1M5 1219 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 POTEHQ6S545 545 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 PARM1Q6UWI2 310 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 CLEC20AQ6ZU45 233 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 LUZP1Q86V48 1076 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 ZSCAN18Q8TBC5 510 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 HNRNPABQ99729 332 aaKnown RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 FAM124BQ9H5Z6 455 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 IL21Q9HBE4 155 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 CBX8Q9HC52 389 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 GDE1Q9NZC3 331 aa7.3□□□□□ -1.24
BRCA1-215ENST00000478531 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 ZFP37Q9Y6Q3 630 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-215ENST00000478531 RNF225M0QZC1 329 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 DCXO43602 365 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TADA3O75528 432 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 PNMA6AP0CW24 399 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 UBXN1Q04323 297 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 FAM78AQ5JUQ0 283 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TXNDC8Q6A555 127 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 MTSS1LQ765P7 747 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 GPRIN1Q7Z2K8 1008 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TMEM150AQ86TG1 271 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 NUP93Q8N1F7 819 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 MAB21L3Q8N8X9 362 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 ZMIZ2Q8NF64 920 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 MRPS31Q92665 395 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 FBXO32Q969P5 355 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 PCMTD1Q96MG8 357 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SMG9Q9H0W8 520 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SIX2Q9NPC8 291 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 FAM207AQ9NSI2 230 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 HESX1Q9UBX0 185 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 LIMA1Q9UHB6 759 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 DNAJC12Q9UKB3 198 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 TSPAN16Q9UKR8 245 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 SORCS3Q9UPU3 1222 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 FHOD1Q9Y613 1164 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 DMDP11532 3685 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 VPS13AQ96RL7 3174 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 LGALS16A8MUM7 142 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 M0QYV0 167 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 NARSO43776 548 aaKnown RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 MICAL2O94851 1124 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 RTN3O95197 1032 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-215ENST00000478531 F11P03951 625 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 PAEPP09466 180 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 VDRP11473 427 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 YWHAQP27348 245 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 GNA15P30679 374 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 AVPR1AP37288 418 aa7.29□□□□□ -1.24
BRCA1-215ENST00000478531 VIPR2P41587 438 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms