RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CTCFLQ8NI51 663 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 PPP1R14CQ8TAE6 165 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 DEPTORQ8TB45 409 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 UTP15Q8TED0 518 aaKnown RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 RUFY2Q8WXA3 655 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 USP7Q93009 1102 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 ZBTB9Q96C00 473 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 SDCCAG3Q96C92 435 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 RBM17Q96I25 401 aaKnown RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF845Q96IR2 970 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 C16orf92Q96LL3 132 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 FOXB1Q99853 325 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 UQCC2Q9BRT2 126 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 CRB3Q9BUF7 120 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 AMNQ9BXJ7 453 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 EDEM3Q9BZQ6 932 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 MYLK2Q9H1R3 596 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 OR10A5Q9H207 317 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 EHD1Q9H4M9 534 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 C8orf33Q9H7E9 229 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 ACAD9Q9H845 621 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 BARX1Q9HBU1 254 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 PARD6AQ9NPB6 346 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 UBN1Q9NPG3 1134 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 TUBA8Q9NY65 449 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 DACT1Q9NYF0 836 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 H2AFY2Q9P0M6 372 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 FNIP2Q9P278 1114 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 TRHDEQ9UKU6 1024 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 FAM50BQ9Y247 325 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 ANKRD6Q9Y2G4 727 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 WDR37Q9Y2I8 494 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 TMED5Q9Y3A6 229 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC4A7Q9Y6M7 1214 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 V9GYY5 206 aaPredicted RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 GLI2P10070 1586 aa3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 EPRSP07814 1512 aaKnown RBP3.8□□□□□ -1.8
FNDC3B-209ENST00000478016 UHRF1BP1LA0JNW5 1464 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ADGRL1O94910 1474 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 PLB1Q6P1J6 1458 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 PASKQ96RG2 1323 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ARPC4-TTLL3A0A0A6YYG9 625 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MROH6A6NGR9 719 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 B4DLN1 442 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CETN3O15182 167 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 XPOTO43592 962 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CUTAO60888 179 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 KCNJ13O60928 360 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SRGAP2O75044 1071 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 KLHL18O94889 574 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FKBP9O95302 570 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 POP4O95707 220 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ADRB2P07550 413 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 INHBBP09529 407 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 RHCEP18577 417 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP5JP18859 108 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 IL11P20809 199 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 JAK1P23458 1154 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP5F1P24539 256 aaPredicted RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 APEX1P27695 318 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MCM5P33992 734 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 RFC4P35249 363 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ADCYAP1R1P41586 468 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 EPS15P42566 896 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 PSMC4P43686 418 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ABCG1P45844 678 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 MTIF2P46199 727 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ATP5OP48047 213 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TKTL1P51854 596 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 USP14P54578 494 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 RIPK4P57078 832 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 BASP1P80723 227 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 RHDQ02161 417 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ACY1Q03154 408 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ROM1Q03395 351 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 GABPB1Q06547 395 aaPredicted RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 PPIDQ08752 370 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 GRIK3Q13003 919 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TRIM14Q14142 442 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FRG1Q14331 258 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 LRRC32Q14392 662 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 STILQ15468 1287 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TERF2Q15554 542 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FUT11Q495W5 492 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 DGKKQ5KSL6 1271 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TTC38Q5R3I4 469 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 TTC39AQ5SRH9 613 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 AKNAD1Q5T1N1 836 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 AADACL4Q5VUY2 407 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ESRP1Q6NXG1 681 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 SLC30A6Q6NXT4 461 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 RPUSD3Q6P087 351 aaKnown RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 DRICH1Q6PGQ1 229 aaPredicted RBP3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 BORAQ6PGQ7 559 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 LRSAM1Q6UWE0 723 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ATF7IPQ6VMQ6 1270 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC149Q6ZUS6 474 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 FKBP9P1Q75LS8 142 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 LPCAT2Q7L5N7 544 aa3.79□□□□□ -1.8
FNDC3B-209ENST00000478016 ZNF804AQ7Z570 1209 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms